KEGG   Erigeron canadensis (horseweed): 122607239
Entry
122607239         CDS       T07610                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122607239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122607239
   03016 Transfer RNA biogenesis [BR:ecad03016]
    122607239
   03012 Translation factors [BR:ecad03012]
    122607239
   04131 Membrane trafficking [BR:ecad04131]
    122607239
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122607239
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     122607239
Transfer RNA biogenesis [BR:ecad03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    122607239
Translation factors [BR:ecad03012]
 Eukaryotic type
  Elongation factors
   122607239
Membrane trafficking [BR:ecad04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    122607239
Exosome [BR:ecad04147]
 Exosomal proteins
  Proteins found in most exosomes
   122607239
SSDB
Motif
Pfam: GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 122607239
NCBI-ProteinID: XP_043636109
LinkDB
Position
7:complement(3158265..3159359)
AA seq 304 aa
MEVILFEFSWKELWSHLWASKRKEIIKVVHMWARPQKTHINISFVLISGFEGDNLTETSP
NLPWYTGPTLLEAIDRINEPKRPSDKPLRLPLHDVYKIGGIGTVPVGQVETGVIKPGMEV
TFGFGLTTEVKSVEMHSKALPEALPGDFVGFNVQNVAAKDLKRGYVASNSKDDPAKGAAS
FTSHVIVMNDYPGQIKVGYEPLLSCHTSHVAVKFAELLTKIDRDTYEDLESKPKFLKGGD
AGIVKMVPIKPMVVEIFSEYPTLGRFVVRNLRQTVAVGVIKNVDKRVPIKRLSAQCGGGG
DDVI
NT seq 915 nt   +upstreamnt  +downstreamnt
atggaagtaattttgtttgagttcagctggaaggagctctggtcccatttgtgggcttcc
aaacgcaaagaaataataaaagtggtgcatatgtgggctcggccacaaaagactcatatc
aacatctcatttgtcctaatctctggttttgagggcgacaacttgactgagacgtcacct
aaccttccgtggtacacaggtccaactctacttgaagccattgaccggatcaatgagccg
aaaagaccatctgacaagcctctccgtcttccccttcatgatgtctataagattggtggg
attggaactgtgcctgtgggacaggttgaaactggtgtgattaagccaggtatggaggtc
acttttggctttggtttgacaactgaagtcaaatctgtagagatgcactccaaagcactg
cctgaggcattgccaggagattttgttggtttcaatgttcagaatgttgctgcaaaggat
cttaagcgtgggtatgttgcttcaaactctaaggatgaccctgcaaagggtgctgctagt
tttacatctcatgtcatcgtcatgaacgactacccgggtcaaattaaagtagggtatgaa
ccattgctatcttgccatacttctcacgttgcagttaagtttgctgaactgttgaccaag
attgaccgtgatacttatgaggatcttgagagtaagcccaagtttttgaaaggtggcgac
gctggaatagtgaagatggttccaataaagccgatggtggttgagattttctctgagtat
cctacattgggtcgatttgttgtgaggaacttaagacagactgttgctgtgggcgtgatc
aagaacgtggataagagggttccaattaaaagattatcagctcaatgcggcgggggtggc
gacgacgtgatatag

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