Erigeron canadensis (horseweed): 122607286
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Entry
122607286 CDS
T07610
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122607286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122607286
04147 Exosome [BR:
ecad04147
]
122607286
04090 CD molecules [BR:
ecad04090
]
122607286
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122607286
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122607286
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122607286
CD molecules [BR:
ecad04090
]
Proteins
122607286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_30
DUF87
AAA_15
AAA_5
DUF815
AAA_24
nSTAND1
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
122607286
NCBI-ProteinID:
XP_043636161
LinkDB
All DBs
Position
7:12090310..12095613
Genome browser
AA seq
1211 aa
AA seq
DB search
MLMVIGTITAIGSGIAMPLQTLIFGELIDVFGGTPDNKAIVHQVSKVSLKYVYLALGAGA
AAFLQVGCWMVNGERQSARIRRLYLKTILRQDVGYFDQETKTGEIVERTSGDTTIIHNAM
GEKVGKFIQLTSTFFGGFVIAFSQGWLLSLVLLSSIPLVVISSAFVTVIMAKLMSRGQAA
YSDGATVVEQTISTIQTVVSFTGEKQAIAKYRKSLTKAYRAGVQEGLVAGFGSGILMFSV
FCCYSLAIWFGGRMIIEKGYTGGQVINIMLAVLYSSFSLGQASPCLSAFTAGRVAAFKLF
QVIHRKSKIDPFATTGQKLDDIRGDIELRDVTFSYPSRPNEMIFEGFSLVVPSGTTTALV
GESGSGKSTVISLIERFYDPQGGEVLIDAINIKDYQLRWLRGKIALVSQEPVLFSSTIKD
NIAYGKDGATLEEIEAAAKIANATNFIKKFPQGLDTMVGSHGSHMSGGQKQRIAIARAIL
KDPKILLLDEATSALDAESERIVQEALDRIMINRTTIIVAHRLSTIKNSDVIAVIHHGKI
VEKGSHFELLEGAYSQLLQLQELNNYSERKGGDQDSPEIIVTSGRYTSDHSNSILRQESS
NISKSTRLSFSINGIEVPRHDKQTVTYTAPNVSLLRLVYMNKPEILVLLLGSVAAVISGI
ILPIYGYLISVIVKTFFKPAHVLRKDSEFWALMLFILGLAYFIATPVRTYCFGVAGCKLI
RRIRLQCFEKVLQMEISWFDKTENSSGMIGAKLSADAASVRSLVGDSLSLLVQSTATALA
GLIIAFLGNWQLAFIVLAMLPLIGLHGYLQVKFVNGFSGDTKEASQIASDAIGSFRTVAS
FCAEDKVMELYEKKCEGPQKEGIKQGVVSAAGFGLSSFLLFVVYATSFYIGARFVAAGKT
TFPKVFQVFLGLSLAAISVSQSGSIYPDTGKAKTAVASIFALLDQKSKIDHSDKTGTTLE
NVKGDIMFSHVSFRYPSRPENQIFRDLCLDIGSGQTVALVGESGSGKSTVVSLLQRFYDT
DSGEILIDGVEIKKLNVKWLRQQMGLVSQEPVLFNETIRVNIAYGKEGKATETEVLAAAE
LANAHKFISGLQNGYDTSVGEKGIQLSGGQKQRVAIARAIVKAPKILLLDEATSALDAES
EKVVQDALDRVIVQRTTVVVAHRLSTIQGADVIAVVKDGVIAEKGKHETLVTIKDGIYAS
LVALHTSASAS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggtcattggaacaattactgctattggaagtggaatcgccatgcctcttcag
acattgatctttggagagctaatagacgtatttggagggactcctgataacaaggccatt
gttcatcaagtttccaaggtatctctaaaatacgtctacttggctctgggggctggtgct
gcagcatttcttcaggtaggttgctggatggtgaatggagagaggcagtctgcacgaatc
agaagattatacttgaaaacaatattgaggcaagacgtggggtattttgatcaagaaacc
aagactggagaaatcgtggaacgtacgtctggtgatactacaattattcataacgctatg
ggagaaaaggttggaaaatttatacagttgacttcaacattctttggagggtttgtgatt
gctttttcacaggggtggcttctatcccttgtgttattatcttcaattcctcttgtcgtg
atttcatctgcatttgttacggttatcatggcaaagttaatgtccaggggacaagctgct
tattctgatggagccaccgtagttgaacagacaattagcactatccaaactgttgtttca
ttcactggggagaaacaagctattgccaagtatagaaaatctcttacaaaagcttacagg
gctggggtgcaagaagggttggttgctggatttggttcgggtatattgatgttcagtgta
ttctgttgctactcgttagcaatatggtttggtggcagaatgattatagaaaaaggatat
actggcggacaggtcataaatataatgctcgccgtcttatatagttccttttcgttaggg
caggcttcaccgtgcttgagtgcatttaccgctggaagagttgcagcctttaaactattc
caggtaatacatagaaagtcaaagatagatccttttgccacaactggtcagaaactggac
gacattcgtggtgatattgaactaagggatgttacttttagctatccatctagaccgaat
gagatgatatttgaagggttttctcttgtggtaccaagtggcacaaccacagctttagtt
ggagaaagtggaagtgggaagtcaaccgtaattagcctcatagaaaggttctatgaccct
caaggaggtgaagttcttatcgatgccataaatatcaaagactaccaactgagatggctt
agaggaaagattgctcttgtcagccaggaacccgttttgttcagttccactattaaagat
aatattgcttacggaaaagatggtgcaacacttgaagaaatcgaagcggcagctaagatt
gctaatgctacaaattttataaagaaattcccccagggactagacactatggttggttcg
catggaagtcatatgtcgggaggacaaaagcagaggatcgcaatagccagggcaatctta
aaagacccaaagattttactattggatgaagctacaagtgctcttgatgcagagtcagag
aggattgttcaggaggcacttgatagaatcatgattaaccgtacgaccattattgttgcc
caccgattgagcacaataaaaaattctgatgtaatcgccgttattcaccatggcaagatt
gtagagaaaggttcacattttgagctattagaaggcgcatacagccagcttttacaatta
caagagctcaacaattactcggaaaggaaaggaggtgatcaggacagcccagagattatt
gtgacttctggaagatatacaagtgatcactccaactctattttaagacaagaatcatct
aatattagtaaaagtactcgcctttcattttccatcaatggtattgaggtaccgagacat
gataaacaaacagtaacttacacggctccaaatgtctcacttcttcgcctggtctatatg
aacaagccagaaatcttagtattactattaggttctgtagcagctgtaattagcggtatc
atcttacctatatacgggtatcttatttcagttattgtaaagactttttttaaaccagct
catgtgcttcggaaggattcagaattttgggccttgatgctttttatacttggtttggca
tatttcattgcaacaccagtaagaacgtattgttttggtgtagccggttgtaagctgata
agaagaattcgactacaatgctttgaaaaagtgcttcagatggagataagttggtttgac
aaaacagagaattctagtggtatgattggtgcaaagctgtctgcagatgcagcttccgtg
agaagtttggtaggagatagtctttcgttacttgttcagagcacagctaccgcgctggca
ggtttaataatagcttttttggggaactggcagttggcttttatagttttagcaatgtta
ccactaataggacttcatggatatcttcaagtgaaatttgttaatggctttagtggggat
acaaaggaggcaagtcaaattgcaagtgatgccataggaagctttagaacagttgcttca
ttttgtgccgaagataaggtgatggagttatacgaaaagaaatgtgaagggcctcaaaaa
gaaggaattaaacaaggggtagtaagcgctgcaggatttgggctgtcgtcgtttttgtta
tttgtagtatatgcaaccagcttttatattggagcacggttcgttgctgcagggaaaact
acattccctaaagtttttcaggtatttttgggcttgagtttggcggccataagtgtttct
caatcaggttccatttatccagacactggaaaagccaaaactgctgttgcttcaattttt
gctcttcttgaccagaaatcaaaaatagaccattcagacaagactgggactactttagaa
aatgtaaaaggcgatatcatgtttagtcatgttagctttaggtatccatctagacccgaa
aatcaaatcttcagggacttgtgtttggacattggttctggccagactgtagcacttgtt
ggtgaaagtggaagtgggaaatcaactgtggtatctctcctgcaaaggttctatgatacc
gattcaggtgagatattgattgatggagttgagatcaaaaagctaaacgtaaaatggtta
aggcagcagatgggtttagtgagccaagagcctgtcttgtttaatgaaaccatccgtgtt
aacattgcatatggaaaggaaggcaaagccacggaaacagaagtcttagctgctgcagaa
ttggctaatgcccacaagttcatcagtggactacaaaatgggtatgatacaagtgtagga
gaaaaaggaatccaactatctggagggcaaaaacaaagagtggcaatagcaagggcgatc
gtaaaggctccaaagattttgctactagacgaagcaactagcgcgctagatgctgaatct
gagaaagtcgtacaagatgcacttgaccgagttatagtacaaagaaccactgtggtggtg
gctcacaggctatccacaatccagggagcagatgttatagctgtcgtaaaagacggtgtc
attgcagagaaagggaaacacgagacgcttgttactatcaaagatggcatctatgcttct
ttagttgcattacatactagtgcttctgcttcttaa
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