Erigeron canadensis (horseweed): 122607311
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Entry
122607311 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122607311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122607311
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122607311
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122607311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
122607311
NCBI-ProteinID:
XP_043636196
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All DBs
Position
7:28040520..28044965
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AA seq
306 aa
AA seq
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MARGGDSKDVMESHPKYLRYDVVTPNADTTNVITKTTNRATEKLPMPSTNGMCELLECPM
CVKLMYPPIHQCPNGHTLCSNCKPRVHNCCPTCRAELGNIRCLALEKVAETLELPCEHQT
LGCHDIFPYYSKLKHEQICRFRPYNCPYAGSECIVTGDIPNLVAHLRNDHSVDMHDGCTF
NHRYVKSNPHEVENAIWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEAKNF
SYSLEVGGYGRKLTWQGVPRSIRDSHQKIRDTQDGLVIPRKLALFFSGGNRKELKLRVIG
RIWKEQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctagaggtggtgatagtaaagatgttatggagtctcatcctaaatatttgaggtat
gatgtagtaacgccaaatgcagatacaactaatgttatcacgaaaacaacaaatagggca
accgaaaagcttccaatgccttcaaccaacggcatgtgtgagcttcttgaatgccccatg
tgtgttaagttgatgtaccctccgattcatcagtgtccaaatggccatactttgtgctca
aattgcaagccaagagttcacaactgttgcccaacatgccgtgctgagttgggtaacata
aggtgtttggctttggaaaaagtagcagaaacgttggagcttccttgcgaacatcaaact
cttggttgccatgatatttttccttattatagcaagttgaagcacgagcaaatttgtcga
tttcgcccttacaattgtccttatgctggatccgagtgtatagttactggtgatattcca
aatcttgttgcacatctgagaaatgaccatagtgttgatatgcatgatggatgcacattc
aatcatcgatatgtcaaatccaacccgcatgaagttgaaaatgctatttggatgctaact
gtattcaactgttatggaagacagttttgtttgcactttgaagcattccagctgggaatg
gctccggtttacatatcatttttacggttcatgggtgaagacagcgaagccaagaatttc
agctattccttagaagttggagggtatgggcgtaaattaacatggcaaggggtcccaagg
agtatccgtgacagtcatcagaaaattcgtgacactcaagacggactagtcattcctagg
aagctagctctcttcttctctggtggaaacaggaaagaactcaaattacgagttataggc
cgtatatggaaagaacagtaa
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