KEGG   Erigeron canadensis (horseweed): 122607384
Entry
122607384         CDS       T07610                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03060  Protein export
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    122607384
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecad02044]
    122607384
Enzymes [BR:ecad01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     122607384
Secretion system [BR:ecad02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   122607384
  Eukaryotic Sec-SRP protein
   122607384
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA APS_kinase ArsA_ATPase AAA_22 ParA nSTAND3 AAA_16 6PF2K cobW AAA_31 NTPase_1 AAA_17 AAA_18 AAA_33 KAP_NTPase AAA_30 ResIII KTI12 ATPase Thymidylate_kin BRCC36_C AAA AAA_14 AAA_24
Other DBs
NCBI-GeneID: 122607384
NCBI-ProteinID: XP_043636283
LinkDB
Position
7:29830416..29836241
AA seq 552 aa
MEALNFATTYPASRHFLPRKTKTCFAHALSFRSSTSSSRELWGIVNSQRLITVGKRNESA
IIRAEMFGQLTSGLESAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFIQAV
SEQAVGVGVIRGVRPDQQLVKIVSDELVKLMGGEVSELTFAKSSPTVILLAGLQGVGKTT
VSAKLAYYLKKQGKSCMLIAGDVYRPAAIDQLVILGKQVDVPVYTAGTDVKPAEIARQGL
REAKKKNVDVVIMDTAGRLQIDKTMMEELKDVKRTLNPTEVLLVVDAMTGQEAAALVTTF
NLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILG
MGDVLSFVEKAQEVMKQEDAEDLQKKIMSAKFDFNDFLKQTRAVAQMGSMSRVLGMIPGM
GKITPAQIREAEKSLQIMEAMIEVMTPEEREKPELLAESPARRKRIAKESGKTEQQVSQL
VAQLFQMRVRMKNLMGVMEGGSVPALSNLEEAMKSEQKAPPGTARRKRRSVSRKQFAGSS
GEPGPRGFGGGN
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggaggccttaaatttcgctactacttatcctgcttcccgccatttcttgccaagaaaa
acaaagacatgtttcgctcacgcgctctcatttcgctcttctacttcatcctcgagggaa
ttatgggggatagtgaattcacaaaggctaattacagtcggaaaaaggaacgaaagcgcg
ataatcagggccgaaatgtttgggcagctcactagtggccttgaatccgcctggaacaaa
ctcaagggagaagaggtgctaacgaaggagaatattgtcgaacccatgagggacattagg
agagcacttctagaagcagatgttagccttcccgttgtaagaagatttattcaagctgta
agcgaacaagccgttggtgttggcgttattcgtggagtcagaccagatcagcaattggtc
aaaattgtaagtgatgagctcgtgaagttgatgggtggagaggtttctgaattgacattt
gcaaagtctagccccacggtgatcttactggctggtctgcaaggggtcgggaagacaact
gtcagcgcaaagttagcttattacctcaagaaacagggaaagagttgcatgctgattgct
ggagatgtatatagaccagctgctatcgatcaactggttattttgggaaaacaggtggat
gttcctgtgtatacagcaggaactgatgtgaaaccagcagaaatagctaggcaaggcctt
cgagaagctaaaaagaagaatgtagatgtagttattatggatacagcaggaagacttcag
atcgacaaaactatgatggaagaattgaaagacgtaaaacggacattgaatccaactgaa
gttttgcttgttgtggatgcaatgactggtcaagaagctgcagctttggtgacaaccttt
aatcttgaaattggaattactggagccattttaactaagctagatggagattcaagaggt
ggagcagctctgagtgttaaagaggtatcaggaaagccaatcaagcttgtaggacgtgga
gagcgaatggaagaccttgaacccttctatccagatcgtatggcaggacgaatcttgggc
atgggggatgttctctcatttgtggagaaggcacaagaagttatgaaacaagaagatgct
gaagatttgcagaagaagatcatgagtgcaaagtttgacttcaatgacttcttgaagcaa
actcgtgccgttgcacaaatgggttccatgtctcgtgttcttggaatgattcctggaatg
ggaaagattactcctgcacaaattcgagaggctgaaaagagcttacaaataatggaagca
atgattgaagtaatgactccagaggaaagggagaagcctgaattgcttgccgaatcccct
gccaggagaaagcgaattgctaaagaatctggaaaaactgagcaacaggtgagccaactt
gttgctcagcttttccaaatgcgtgttcggatgaaaaatttaatgggtgtaatggaaggt
ggatctgttcctgcactcagcaacctcgaagaggcaatgaaatccgaacagaaggctcct
ccaggtactgcaaggaggaagagaagatcagtatcgaggaaacaatttgcaggctcatca
ggagagcctggccctcgtggttttggtggtgggaactga

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