Erigeron canadensis (horseweed): 122607418
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Entry
122607418 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122607418 isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122607418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122607418
Spliceosome [BR:
ecad03041
]
Complex A
U1 snRNP components
U1 related factors
122607418
Complex B
122607418
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GFIT
Motif
Pfam:
WW
Transposase_24
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
122607418
NCBI-ProteinID:
XP_043636321
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Position
7:25307452..25311860
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AA seq
560 aa
AA seq
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MDTKPQNLASQQASSASQDAAADWQEFIATDGRRYYYNNKTKQSSWEKPFEMMTLLERAD
ASTVWKEFTTAEGKTYYYNKDTKQSKWSIPDELKLARKQAEKEASRETHSPATLTSSTLD
QLSASVSSTNDVSSPVGVTPIIPVANEVAESSSGCAARGLKRKRGACKNLNLEKALENND
GDPLLISFDIDDQRTYGPVGKNASMFKSLVGAWVRYVPLYHDSWEKVPADKKDHLWPTIE
RYFDMKPYLDRLENDPVRKGVINGVHAYCAERYRGAKYHFKNKWFTKRGGPEAVQEIRAQ
PPPHMDIEEWGRLVNCYMSEGALHRSEVNSGNRALQQYIGTHGRKSFAEIRHDVRQRTGE
YPTLISTFGDTHMRDGAYVDMLAQQQHEQMQQLWDSQQSSPNPMTEEEIMEQVLGTRGGH
HRGRGRIVRGSSLETSAGSQVKGETSAGLQGKGETSDGSQGKGVTTAGSQGKDETSDGSQ
GKGVTTAGSQGKGGRWFSQEEVEQREARLRSELLKQMEAQMEARLQAQIKEQMQTMFDQH
MRSQGFHVQQPVPQPTSNPH
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatactaagccccaaaatctggcttcacagcaggcatcaagtgctagtcaagacgca
gcagctgattggcaagagtttatagctaccgatggcagaagatattattacaacaataaa
acaaagcagtcttcttgggaaaaacccttcgagatgatgacacttctggagagggctgat
gcctctactgtttggaaagagttcacaactgcagagggtaaaacatactattacaacaag
gatacaaagcaatctaaatggagtatacccgacgagttgaagttggctcgtaagcaggct
gaaaaagaagcttctagagagactcattctccagccactttaacatcctccacattggat
caactttcggcctctgttagctctactaatgacgtttcaagccctgtaggggttacacct
ataattcctgttgccaatgaggtggctgagtcttcatctggatgtgccgccagaggtttg
aagagaaagcgtggggcctgcaagaatcttaatttggagaaagcattggaaaataatgat
ggtgatccactacttatatcatttgatatagatgaccagaggacttatgggccagttggg
aaaaatgcatctatgtttaaaagtttggtcggggcttgggtgaggtacgtcccgttgtat
catgattcctgggaaaaagtccctgcggataagaaggaccatctttggccaactatagag
agatatttcgacatgaaaccttatcttgatcgcctggaaaatgatccggtgaggaaaggc
gtgataaacggggttcatgcctattgtgccgaaagatacaggggcgccaagtatcacttt
aaaaacaagtggtttacaaaaagagggggtccggaagctgtacaagaaattcgggcgcaa
cccccaccccacatggacattgaggaatggggtcggcttgtgaattgttatatgagcgag
ggggctttgcataggtctgaggtaaattccgggaacagggcactccaacaatatatcggg
acacatggcagaaagtcgtttgctgaaattcgccatgatgtgcgccaacggacgggtgaa
tatccaactctgatctcaacttttggagatacgcatatgagagatggggcctatgtcgac
atgctggctcaacaacaacatgagcaaatgcagcaattatgggattcccaacaaagtagt
ccaaacccaatgacagaagaagagatcatggaacaagtcttgggaactcgaggcgggcac
catcgtggacgtggaaggattgtacggggttcatctttggaaacaagtgctggatcacaa
gtcaagggtgaaacaagtgctggattacaaggcaagggtgaaacaagtgatggatcacaa
ggcaagggtgtaacaactgctggatcacaaggcaaggatgaaacaagtgatggatcacaa
ggcaagggtgtaacaactgctggatcacaaggcaagggtggacgatggttctcacaggaa
gaggttgagcaaagggaggcacgtttacggtcggaattgctcaagcaaatggaagcgcaa
atggaggcgcgtttacaagctcaaattaaggagcaaatgcagaccatgtttgatcaacac
atgagaagccaaggcttccatgtccaacaacccgttccccagccaacttcgaatccccat
taa
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