Erigeron canadensis (horseweed): 122607435
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Entry
122607435 CDS
T07610
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122607435
Enzymes [BR:
ecad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
122607435
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122607435
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
Methyltransf_8
CMAS
DUF2226
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
122607435
NCBI-ProteinID:
XP_043636342
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Position
7:22533945..22537560
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AA seq
340 aa
AA seq
DB search
MLKRFTISKPHKFPFHNHTQMKEIKTKRSPLNPQTKSSSSVQSTPEIEKKYVHLVYDAIA
PHFSATRFAKWPKVSTFLNNLPSGSVILDAGCGNGKYLGLNSDCFFIGCDISEPLIKICS
DRGHEVLVADAVNLPYRDGYGDAAISIAVLHHLSTENRRKKAIHELVRVVKKGGLVLITV
WAVEQEDGNLVKKWTPVAGKYLEEWIGPGSPRGSPRSRSGSSVALESIPESEVSGNSEEV
KDFGNVNEKNEDFGEDKQQEYFVPWHLPYHRAEVSGASAAAVENGFARKDNQKGAIVYDR
YYHVFGEGELERLVSGMKNAVIVDQFFDKSNWCVILEKTS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaagattcacaatatcaaaaccccataaattcccctttcacaatcacactcaa
atgaaagaaataaaaacaaaaaggtctccattaaacccacaaaccaaatcttcatcaagt
gttcaatcaaccccagaaatcgaaaaaaaatatgtccatcttgtctatgatgcaattgca
cctcattttagtgctacccgttttgcaaaatggccaaaagtttccacgtttttgaacaat
ttaccatctgggtcagtaattcttgatgcaggatgtggtaatggtaagtatctagggtta
aattctgactgtttctttattgggtgtgatattagtgaacctttgattaagatatgtagt
gatagaggtcatgaggttttagtggcagatgctgtgaatcttccgtatcgagatgggtac
ggtgatgccgcgatttcgattgcggttttgcatcatttgagtactgaaaataggaggaag
aaagctattcatgagttggttagagttgtgaaaaaaggtgggcttgttttgattactgtt
tgggctgttgaacaagaggatgggaatttggttaagaagtggaccccggttgccggtaag
tatttggaggagtggattggtccggggagtccgaggggtagcccacggtctaggagtggt
tcgtcggttgctttggaaagtattccggaaagtgaggttagtgggaatagtgaagaagtt
aaagattttggtaatgtgaatgaaaagaatgaggattttggagaggataagcaacaagag
tattttgtgccgtggcatttgccttatcatcgagctgaagtgagtggtgcttcggctgct
gcagttgagaatggttttgcgcggaaagataatcagaagggtgcgatcgtttatgataga
tattatcatgtgtttggtgagggtgaacttgaaaggttggtttctggcatgaagaacgca
gttattgtggatcaattcttcgacaagtctaactggtgtgtaattcttgagaaaacctcg
tga
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