Erigeron canadensis (horseweed): 122607495
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Entry
122607495 CDS
T07610
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122607495
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
122607495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
122607495
NCBI-ProteinID:
XP_043636410
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All DBs
Position
7:complement(897799..906534)
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AA seq
681 aa
AA seq
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MASYRPFPPPPPPQSNFGPPPPPPVGPPQPNQYTQNWGYQNSTFQPGGYVAPPPPPPPPV
NPVPNQQQFTSYPPPPPPPEAAYPPPPPPSQPAPPGQMYFPSSQYSQLQQPPPPPPPNSS
PPSSSVPPPPPPPPSHPPSPPPPPANVPVNNQVKESKHDGYKRQSNDMEKSKWRDPALSH
HAGPSRNQSKPAPLPPMPARKSSKVETEEERRLRKKKEMEKQRQDEKLKQQLKESQTKIL
QKTHISSSGIKPHGSVSGSHMGDRRATSFLSGERIENRLKKPTTFLCKLKFRDELPDPTA
QPKLLSIRRDKDRAVKYALTSLETVHKPHLHVEPDLGIPLDLLDLSVYNAPKDEVLHIAP
EDERLLQEDVTLTPVKKDGLKRKERPTDKGMAWLVKTQYISPLSTDATRQSFEKQAKELR
ERRGNALLDNLNSRERKIKDIKASFEACKSHPVHATNKKLQPVEILPLFPDFERLGDQFV
VATFDGPPTVDSESYNKMDKAVRDAHESQAVMKSFVASTSDAAKPDKFLAYMVPSVGELS
KDIYDESEDISYTWVREYHWDVRGEDADDPTTFLVSFGESEARYMPLPTKLILRKKRARE
GKQSDEVEHFPVPASITVRQRSRVSVEMKESESYVGLKGRSSNSRHHSRMDMEDDVNQHH
NGMEDDGDMDQFSGGEYDISD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatacagaccattccctcccccgccgccaccgcaatcgaatttcggaccgcca
ccacctcccccggttggtccgccacaaccgaatcagtatactcaaaattggggatatcag
aattcgacttttcaaccgggtggttatgtagctccaccaccaccaccaccaccacctgtt
aaccctgttccgaatcaacaacagtttacgtcgtacccaccgcctccgccgccgcctgag
gcggcgtatccgccgccaccgccaccttcccagcctgcaccacctggacaaatgtatttt
ccgtcttcgcagtatagtcagttgcaacaaccgccacctccaccacctccgaattcctct
ccacctagctcatctgtcccaccgcctcctcccccacctccatcacatccgccttcgcct
cccccacctcctgcgaatgtgcctgtaaataaccaagttaaggaaagtaaacacgatggg
tataaaaggcagtcgaatgatatggagaaatctaaatggcgtgacccggcgctttcccat
catgcgggtccgtctagaaatcagtccaagcctgctcctttgccgcctatgcctgcaaga
aaatcaagtaaggtcgagactgaagaagaaaggaggctacgtaagaagaaagaaatggaa
aagcaaaggcaggacgaaaaacttaagcagcagttgaaggaatctcaaactaaaatcctc
caaaagacccatatttcatcttcggggatcaagccgcatggttcggttagtggctcacat
atgggtgatagaagggctacatcattcttgagcggtgaaaggatagagaatcgcctgaag
aagccaacgaccttcctttgcaagttgaaattccgggacgagttaccagatccaacagct
caaccaaagcttctgtctattaggagagataaagatcgagctgtcaaatatgctctcact
tcactggaaacggtgcataagcctcacttgcatgttgagccagaccttgggataccactt
gacctacttgatctcagtgtctacaatgctccaaaggatgaagtactacatattgctcct
gaagacgagagattgttgcaggaggatgttactttgacccctgttaaaaaagatgggtta
aaaagaaaggagcgtcccacggataaagggatggcttggcttgtcaagacgcaatatatc
tctcctcttagcacggatgcaacaagacagtcatttgaaaaacaagcgaaagaactacgg
gagaggcgtggaaatgccctactggacaaccttaatagtagggaaaggaaaatcaaggac
atcaaggcttcattcgaggcttgcaagtcgcacccagttcatgcaactaacaaaaagttg
cagcctgtcgaaattttgccattatttcctgattttgaacggctgggtgatcaattcgtt
gttgcaacctttgatggtcctcctactgttgattcagaaagctacaacaaaatggacaaa
gctgttagggatgcccatgaatctcaggctgtcatgaaaagttttgtggcaagcacctcg
gatgcagctaaacctgacaaattcttggcttacatggttccttcggttggcgagctatca
aaggatatatatgatgaaagtgaagatatatcttacacgtgggttcgtgaatatcactgg
gatgttcggggtgaggatgcagatgatcctacgactttcttggtgtcatttggggaatca
gaggctcgctacatgcctctgccaacaaaacttatattaaggaagaagagagcgagggaa
ggaaagcaaagtgatgaggttgaacatttccccgtaccagcgagtattacagtgaggcaa
agatcacgtgtttcagttgaaatgaaggaatctgagagttatgttggtttgaagggcaga
agttcaaattctagacatcatagtagaatggacatggaagatgatgtaaatcaacatcat
aatggcatggaggatgatggtgatatggaccagtttagtggaggcgaatacgatatttct
gattga
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