Erigeron canadensis (horseweed): 122607568
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Entry
122607568 CDS
T07610
Name
(RefSeq) zinc finger homeobox protein 4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122607568
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122607568
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122607568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-RING_10
Rtf2
zf-rbx1
Zn_ribbon_6
RING_XB3-XBAT31
zf-RING_4
zf-ANAPC11
TerY_C
CR_prot_dom_plant
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122607568
NCBI-ProteinID:
XP_043636508
LinkDB
All DBs
Position
7:complement(32751030..32758728)
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AA seq
236 aa
AA seq
DB search
MSTEVQVARHAKASRRRKEALDLNVPPQAENLEQVGGPAISLGHGGQGGGPAISAISVDP
SVQVPPRAAGSIQTTPIDVEDIDDDVLISSPRAFEEAKKKSRRTRRTVVLDVDSDEEGAI
WVNQANKRRRDQTNFPIPYVNLEGSSGYMRARPKYVARAPAPPPPPPPPPPPPPPEPAFT
CPICMGALVEEVTTRCGHIFCKGCLKPAIKAQHKCPTCRRKINNKDMIRVYLPTTK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaggtccaagtcgccaggcatgcaaaagctagtagacgaaggaaagaagca
ctggatcttaatgttcctccacaagctgaaaacctggagcaagttggtgggccagccatt
tcgcttggacacggtggtcaaggtggtgggccagccatttcagctatttcagtagatcct
agtgttcaagttccacccagagcagctggatctatacaaactaccccaattgatgtagag
gatatcgatgatgatgtccttatatcctctcccagagcatttgaagaagctaaaaagaaa
tcacggcgaactcgaaggactgtggtgttagatgtggattctgacgaagaaggtgctatt
tgggtaaaccaggcgaacaaacgtagaagagatcaaacaaattttccaataccttacgtg
aatttggaaggaagtagcggctatatgagggcgagaccaaagtatgttgcacgggcaccg
gctccaccaccacctccaccaccaccaccaccaccaccaccaccggagccggcctttacc
tgtcctatctgcatgggagctttagttgaggaggtgacaacaaggtgcggtcacatattt
tgcaagggatgcctcaagcctgcaattaaagctcagcataaatgccctacctgtaggcgg
aagataaataacaaagatatgatcagggtttatctcccgaccactaagtga
DBGET
integrated database retrieval system
