Erigeron canadensis (horseweed): 122607576
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Entry
122607576 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122607576
KO
K08518
syntaxin-binding protein 5
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122607576
Membrane trafficking [BR:
ecad04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122607576
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122607576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
WD40
WDR55
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_HPS5
Synaptobrevin
Beta-prop_IFT140_1st
NBCH_WD40
TFIIIC_delta
CPSF_A
TBCA
Lgl_C
Motif
Other DBs
NCBI-GeneID:
122607576
NCBI-ProteinID:
XP_043636522
LinkDB
All DBs
Position
1:28666382..28679909
Genome browser
AA seq
1116 aa
AA seq
DB search
MFTKLFNRNSQPSSPRADHHQDVQQLKDFDPHVVVHYGIPSTASILAFDPLQQLLAVGTL
DGRIKVIGGDNIECLLISPKPVPFKNLEFLQNQGFLVSVSNENVVQVWDLGKRQLASNLQ
WESNISAFSVVCNTNYMYVGDEYGYMSVLKYDSEEGNIQHMPYQLPVDLIADDAGISLPD
QQSVVGMLSQPFTSGKRVLIAYQNGVIILWDAFEDKAIIAKSHNDLHVKDEIIVRSTIDV
RPESLNNKLVGEQAEKEISALCWVSSDGSILAVGYVDGDIMLWNVPTMTSNKDQKTNKSS
NIAVKLRLSSGDRRLPVIVLHWSNSTHSGSGGQLFVYGGDDIGSEEVLTILNLDLSSGLE
ALKCVKRLDLTLNGSYADIELVPNVGAAGSSTTLFVLTNPGQLHAYDDDCLSGLMSAPET
MHALNAVQCPVTLPTVEPYMTIAKLCLVDDDEGQQRILKETVLAAKPQLASPSTTGTIKW
PVSGGFPSQLFSTENVGVERIYIAGYQDGYVRIWDATFPVFSLIFVLGIQVEGIEVPGAS
EPISALDFHSPTTSLAVGNDCGLVHLLKLVGESEKLNMHFVTETKREGIELHHKNGWQST
AVFSLIRSPVRSLKYTFSAARIVVGHESGKAVVLDVQSSSILLITDCFASSSSPVVSVAM
KTYLPTDTDDHEQSGDTSPSDPDKEMAFILTKDAHITLVDSSSGNKICSQLVNPKESAAI
SISLLDEKYSVRGLSEENPVNSAQDLTDRKESLQSSTEPESDSTETEVTTLSEDTELWKN
FVDSLILVCCEDSMLLYSTKSLIQGEPNFIRKVDLEKQCSWMTTFKKNDMESGVVLVYST
GDVEIRSLPDLKVLAETSLMSILRWNFKNNMENTMSSFGNGHITMVYGCEYAIISLFTSE
NDFRIPEALPRLHDKDVAEAAEAALKFSLSQKNKQTAPAGILGGVIKGIRREKENDNAHI
EETRDILVSKLETLFSRTPFSVSDLDLDLRDDFDVPVKLVVEKIEVEPKFPEPPSENRSQ
IEKNEKTERGRLFEGGSAIAEPKARTADEIKAKYRKTGMGDTSAMAQEAKDKLLERQMKL
EKLKENSEELASESENFASLAGELAKQMENRKWWQL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgaaattgtttaacagaaattctcaaccatcttctccacgtgctgatcatcac
caggacgttcaacaattgaaggactttgatccacatgtcgttgttcattatgggatccca
tctaccgcatccatccttgcctttgacccccttcaacagctactggctgttggcacactg
gatggcaggataaaggtgattggtggtgataacattgaatgtcttttaatatctccaaag
ccagtaccctttaaaaacctagagttcttacaaaaccaaggctttctggtcagcgtctca
aatgaaaatgtagtgcaggtctgggatttaggaaagaggcaactcgcttctaacttacaa
tgggaatctaatataagtgcattctctgtagtatgtaacactaattacatgtatgttgga
gatgagtatggctacatgtctgtattaaagtatgacagcgaagaagggaatatccaacac
atgccttatcagcttcctgtagatctcatagctgatgatgctgggatttcattacctgat
caacaatctgttgtgggcatgctttcccaaccttttacctccggaaagagagtgttgatt
gcatatcaaaatggagtgattattttatgggatgcttttgaagataaagctataattgct
aaaagccacaatgatttacatgtaaaggatgaaattatagttcgttctacaattgatgtt
agacccgagagcttaaataataaattggttggagagcaggccgagaaggagataagtgct
ctctgttgggtttcttctgatgggtcaatacttgctgttggttatgttgatggagatatc
atgttatggaatgtaccaactatgacctctaacaaagatcagaaaacaaataagtcatct
aatattgctgttaagttaagattatcttcaggtgacagaagacttccagtcattgttctc
cattggtcaaacagtacacacagtggttctggaggtcaactttttgtgtatggaggtgat
gatattggatcggaggaagtcctgacgatcctgaatcttgacttatcatcggggctggaa
gctctgaaatgtgtcaagcgcttagaccttacacttaatggttcatatgcggatatagaa
ttggttcctaatgttggggcagcgggaagtagtactacactttttgtgctgactaatccg
ggacaattgcatgcctacgatgacgattgcttgtctggattaatgtcggctccagagaca
atgcatgcattaaatgctgttcaatgtcctgtaactttaccaactgttgaaccttatatg
accattgcaaagctttgtttggttgatgacgacgagggtcagcaaagaattctcaaggag
acagttttggctgcaaaacctcagttagcatctccttcaaccactggaactataaagtgg
cctgtgagtggtggctttcccagtcaactattctcaactgaaaatgtcggagttgagagg
atatatattgcagggtatcaagatggctatgtcagaatctgggatgccacctttccggtt
ttctcactgatttttgttcttggaattcaggtggaaggtatcgaagttcctggtgcaagt
gaaccaatatcagcattggattttcactctccaacgactagtttagctgtcggaaatgat
tgtggtctggttcatctacttaagttagttggagaatctgaaaagttaaatatgcacttt
gtgacagaaaccaagcgtgaaggtattgaattgcaccataaaaatggatggcaatcaaca
gccgtcttttctctcatacgttctcctgtacgaagcctgaagtacacattttctgctgct
agaattgttgttggacatgaatccggtaaggctgttgtactcgatgttcagtcatcatca
atactgttaattaccgattgttttgccagttctagttctccggttgtgtctgtggccatg
aaaacatatttaccaactgacactgatgatcatgagcaatccggagacacatcacctagt
gatccagataaggaaatggctttcatattaaccaaggatgcacatatcacccttgtggat
agtagtagtggtaataagatctgctctcaattggtaaacccgaaggagtccgctgcaata
tcaatatccttgttagatgaaaaatattctgttcgaggattatctgaggagaatcccgtg
aactcagcacaggatttgaccgatagaaaagagtctttacagtccagtactgagccagaa
agtgattcaactgaaactgaagtaactaccttaagtgaagacactgaattgtggaagaat
tttgtagactcactcattttagtttgttgtgaagattcaatgcttttatactcaaccaag
tctctaattcagggagaaccaaatttcatcagaaaggttgatttagagaaacaatgctcc
tggatgacaacttttaagaaaaatgatatggaatctggagttgttttagtttattcaacc
ggagatgttgagatcaggtccttgccagatcttaaagtgctggcagaaacttctttaatg
tccatcctcagatggaacttcaagaataacatggaaaacacaatgagctcttttggtaat
gggcacataactatggtgtacggttgtgaatatgctattatatctcttttcacctctgaa
aatgacttcaggatcccagaggctctaccgcgccttcatgataaagatgttgcagaagct
gcagaggctgctcttaaattttctctaagccagaagaataaacagactgcaccagcagga
atacttggtggtgtcatcaagggcataaggagagaaaaagaaaatgacaatgctcatatt
gaagaaactcgggatatccttgtttctaagctagaaaccttgttttctaggaccccgttt
tcagtttcagatttagatttggatctgagagatgactttgatgtgccagtcaaattagtt
gtagaaaaaattgaggtcgaaccaaagttccctgagccaccatccgagaatcgaagtcag
attgagaaaaatgagaaaacagagagggggagattatttgaaggtggctctgctattgca
gaaccaaaagctaggacagcagatgaaatcaaggccaaatatcggaagacagggatgggg
gatacatcggctatggctcaagaagcaaaagacaagcttctcgagcgccaaatgaaactt
gagaaactaaaagaaaactcggaagaactggcaagtgagtccgaaaactttgcatcattg
gcaggcgagcttgcaaagcaaatggagaatcggaagtggtggcaattatga
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