Erigeron canadensis (horseweed): 122607579
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Entry
122607579 CDS
T07610
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122607579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122607579
Membrane trafficking [BR:
ecad04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
122607579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
HEAT
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
HEAT_2
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
122607579
NCBI-ProteinID:
XP_043636520
LinkDB
All DBs
Position
7:38061050..38074672
Genome browser
AA seq
1402 aa
AA seq
DB search
MKLMALGDLMESRFSQHSHSHAHISSVYRTSSIDSSQYNVNVNVVQDVIVDADRDRERDR
DRDSSSESVVGVQRREDSETVVSSNISYGNVNGNGIAATTSMAYLPQNIVLSELRHDAFE
ACTPSGPAESGLVSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSM
APQKALDTIGKTLSFQYERWQPKAKYKTQLDPTVEEVKKLCTTCRKYAKSERVLFHYNGH
GVPKPTANGEIWFFNRSYTQYIPLPISDLDSWLKTPSIYVFDCSAAGMIVNAFIELQDWN
LASSSGSSPRDCILLAACEAHETLPQSHEFPADVFTSCLTTPIKIALRWFCTRSLLHESL
DYSLIDRIPGRQTDRKTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNF
LLAERIMRSANCSPVSYPMLPPTHQHHMWDAWDMAAEICLSQLPSLLEDPNAEFQPSPFF
TEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLALS
VGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHTYFIRFLDSVEAYP
EQRAMAAFVLTVIVDGHRKGQEACIEANLIHVCLRHLQGGSAPNDTQTEPLFLQWLCLCL
GKLWEDFTEAQIIGLQANAPTIFSLLLSEPQPEVRASAVFALGTLLDVGFDSSRDVGDDE
RDDDEKVGAEISIVKSLLNVVSDGSPLVRAELAVALSRFAFGHNRHLKSIAAAYWKPQSN
SVLSSLPSFTVRSSVSGYNTPNQYSQIGPLSRVGVDSQPASRDGRVSSSSPLATSGIMHG
SPLSDDSSQHSDTGLLNDCVTNGVVNHTKPRQLDNALYSQCVSAMCTLAKDPSPRISGLG
RRVLSIIGIEQVVTKPAKPNSGGSRVGESSAAANSFAGLARSSSWFDMNGGTGHLPLTFR
TPPVSPPRPSYLTGLGMRRVCSLEFRPHLMDSGLADPLLGCPGGSGSSERSFLPQSTIYN
WSCSHFSKPLLTATDGTEEVQARREDREKFALEHITKCQHSSGSSLHNPIARWDTKFETG
ARTALLQPFSPLVVAADEGECIRVWNYEEATLLNSFNNHDNPDKGISKLCLVNELDESLL
LVGSSDGSVRIWKDYTSKGKEKLVTAFSAIHGHRPGVRSVSAVVDWQQQSGYMYASGEIS
STMVWDLDKEQLLSSIPLASDCSISALAASQVHGGQYAAGFVDGSVRLYDIRTPDGLVCV
TRPHTHRVDRVGGIERVVGIGFQPGLEPAKIVSASQAGDIQFFDIRNQSDAYLTIEAHRG
SLTALAIHRHAPLIASGSAKQLIKVFNLEGDQLGTIRYSPTFMAQKIGSVSCLAFHPYQI
LLAAGAADACVSIYADEILPPR
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatggcattaggagatttaatggaatctaggttttcgcaacattcgcattct
catgctcatataagtagtgtgtatcggacgagttcgattgattcgtcgcagtataatgtt
aatgttaatgttgttcaagatgtaattgtggatgctgatagggatagagaaagggataga
gatagggatagtagttcggaatcggttgttggagtgcaacgaagggaagattccgagacg
gttgttagtagtaatattagttatggaaatgtgaatgggaatgggattgcagctacaaca
agtatggcttatttgcctcaaaatattgttttgtctgagcttagacatgatgcttttgaa
gcttgtactccttcgggtcctgctgaaagtgggttggtttcgaaatggcgacctaaagat
cggatgaaaacaggatgtgttgctctagttttatgtttgaatatcagtgtggacccacct
gatgttataaagatctcaccttgtgccagaatggagtgctggatagatccattctctatg
gccccacaaaaagcacttgatacaattgggaaaacattgagttttcagtatgaaaggtgg
caacccaaggccaaatacaagacgcagttagatccaactgtggaagaagtgaagaaactg
tgtactacatgtcgcaagtatgccaaatctgaaagagttttattccattacaatggtcat
ggcgtacctaagccaactgccaatggtgaaatttggttttttaacaggagttatacacag
tatattcctttgcctatcagcgaccttgactcatggttgaagactccatccatatatgtg
tttgattgctctgctgctgggatgattgttaatgcttttatagagctccaggattggaac
ctcgcaagctcttctggaagttcaccacgagactgtattcttcttgcagcttgtgaggct
catgagacccttccacaaagtcacgagtttcctgctgatgtgtttacttcatgtctcacg
actcctatcaagatcgcattgagatggttctgcacccgttcgttactacacgagtcactt
gattactcgcttatagaccgaatacctggccgtcaaactgaccgtaagacacttcttggt
gagctgaactggatttttactgccgttacagacacaattgcctggaatgttcttccacat
gatttatttcaaagattattcaggcaagatctgttggtcgctagtttgtttcggaacttt
ttacttgcagaaagaattatgcgttctgcaaattgttcacctgtatcttatccaatgctg
cctccaactcatcaacaccatatgtgggatgcatgggacatggcagctgaaatctgcctt
tcccagctcccatcgttgcttgaggatcctaatgcggaatttcagccaagtccgtttttc
acggaacaattaaccgcatttgaggtgtggctagatcatgggtctgaacacaagaaacca
cctgaacagttgcctattgttcttcaggttttactcagtcaatgccataggtttcgtgct
cttgtgcttcttggaagatttcttgatatgggtccatgggctgttgatttggctttgtcg
gttggaatatttccatatgtcctgaagctattacaaacaactacacctgaacttcgacaa
attcttgtgtttatctggacaaagatcctagcgcttgataagtcatgccaggtggatctg
gtgaaggatggtggccacacatattttatcaggtttttggatagtgtggaagcataccct
gaacaacgggctatggctgcatttgttttgactgtcattgtggatggacatcgaaagggt
caagaagcgtgtattgaagctaacttaatccatgtgtgcttgagacatcttcaaggcggt
tcagccccgaatgacacacaaactgagccactgtttttacagtggttatgtctttgtctg
ggaaagctgtgggaagatttcacagaagcacagataataggcctgcaggctaatgctcct
actatattttcacttctactatccgagccccaacctgaggttagggcttctgctgttttt
gcgttaggcactttacttgatgttggatttgattcatctagagatgtcggagatgatgaa
cgtgatgatgatgaaaaagttggggctgaaattagtattgttaaaagccttttaaatgtt
gtttcagatggaagtccgttggtcagggctgagctggcagtagctctttcacggtttgca
tttggacataatcgacatctgaaatctattgctgctgcatattggaaaccacagtctaac
tccgtattaagctccctgccttcatttactgtcaggagttcagttagtggctacaatact
cctaaccagtattcacaaattggtcctctttcaagagtgggtgttgacagccaacctgct
tcaagagacggccgggtttcttctagcagccctcttgctacatccgggataatgcatggc
tcaccactatccgatgactcatcacagcactccgacactggcctgctgaatgactgcgtt
acaaatggtgtcgtgaaccacacgaaaccccgacagttagacaatgccttgtattcacaa
tgtgtatccgccatgtgcacattagcaaaggacccttcaccacgcatttcaggtttgggc
cgacgtgttctttccattattgggattgaacaagtggtaacgaagcctgccaaacccaac
tctggcggttcacgggtgggtgaatcttctgctgccgcaaatagttttgctggattagct
cgttcatcttcttggtttgatatgaatggaggtacaggtcatctaccgttgacattcaga
actcctcctgttagtcctccaagaccaagttacttgacaggattaggaatgcggagggtg
tgttctcttgagttcaggccacatttaatggattcggggctagccgaccctcttttaggt
tgcccaggaggttcagggtcttcagaacgcagttttcttccccaatcaaccatttataac
tggagctgtagtcatttttcaaaaccgcttcttacagcaactgatggtactgaagaagtt
caagctagacgtgaagaccgtgaaaagtttgctcttgaacacatcaccaagtgccaacat
tcttctggtagtagtcttcacaatccaattgctcgatgggacacaaaatttgagactgga
gctagaacagctttgctgcaacctttttccccattagtagttgctgcagatgagggtgaa
tgcatcagagtttggaactacgaggaagcaacattgcttaacagtttcaacaatcatgat
aatcctgacaaagggatatcaaaactatgcttggtgaatgagcttgatgaaagcttactg
cttgttggctcgagtgatggaagtgtacgcatatggaaagattacacttctaagggtaaa
gagaaacttgtaactgccttctctgctattcatggtcatagacctggtgttaggagtgtc
agtgcggttgttgattggcagcagcagtctggctatatgtatgcttctggtgaaatttca
tcgaccatggtttgggacctggataaagagcaacttttgagttctattcctctagcatca
gattgcagcatttcggcactggctgcttctcaagttcatggtggtcaatatgcagctggc
tttgtagatggttctgtcagactatatgatatccgaacacctgatgggcttgtttgtgtc
acccgaccgcacactcatagggtagatagagttggcggtatagaacgagttgtgggaatt
ggctttcaacctggacttgaaccagctaagattgtgagtgcatctcaagcaggagatatt
caattttttgatatcagaaatcaaagtgatgcctacttgaccatcgaagctcaccgtggc
tcattgacggctctagccattcacaggcatgcaccccttatagccagtggctcagccaaa
caattgatcaaagtcttcaatcttgaaggtgatcaattgggtaccattcgatactctcca
acatttatggcccaaaaaataggatctgtaagttgtctagctttccacccctatcaaatc
ttattggcagccggggctgccgatgcctgtgtttccatctatgctgatgaaatattgcca
ccaagataa
DBGET
integrated database retrieval system
