Erigeron canadensis (horseweed): 122607610
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Entry
122607610 CDS
T07610
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122607610
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122607610
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
DUF3303
CarboxypepD_reg
HGWP
Motif
Other DBs
NCBI-GeneID:
122607610
NCBI-ProteinID:
XP_043636559
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Position
7:complement(24349599..24356161)
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AA seq
676 aa
AA seq
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MYLHYYFLFLSALSFHIFSPDKLYVTRAQRSDMDAIGVTLTFQENHVVMSNGLVQITLSN
PEGHITGIQYNAIDNLLEVMNDESNRGYWDVVWSPPDSVKTKGTLERLGGTGCEVIVETE
DQVELSFSRTWNSSLEGKLVPLKIDKRYILLRGSSGFYTYAIYEHLEEWPSFNLDNTRVA
FKLRKDKFHYMANSDDRQRKMPSPDDRLPGRGEELAYPEAVLLVNPVEPEFTGEVDDKYQ
YAVELKDLRVHGWICMDPLVGFWQITPSNEFRVGGPIKPELNSHVGPTTLAVLSSTHYGG
SELVLKFSEKESWKKVFGPIFIYLNTISDGEDPHTLWDDANNQMSTEVKHWPYDFVTSNE
FQSAQQRGSVSGRLLVQDRFISSGDCISANGAYVGLAPPGDVGSWQRECKKYQFWTETNE
EGYFTIKNVIIGEYNLYGWVPGFIGDYHNFTIINITSGVNINMGDLIYEPPRAGPTLWEI
GFPDRLAAEFYIPDPDPKYANSFLLNKSNRFRQYGLWDRYQEIYPNDDLVYTVGESDYTK
DFFFAHVLRTNGMNKYDKTTWTLKFNLNTVNESETYILRLALASVHQSNLQVRVNDLNTS
SLFSTGIIGGDNAIARHGIHGIYWLFNIEIPGICLYSNGENSIYLTQVHNESRFQGVMYD
YIRLEAPLTSIINKIS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttcactactacttcctctttctctctgctttgagctttcatatattttctcca
gataaattatatgtaacaagagctcaacgatccgacatggatgccattggggtgacccta
acctttcaagagaatcatgtagtaatgagtaatggcttggtccaaatcactctctcaaat
ccggaagggcatatcacgggcatacagtacaatgcaatcgataatttgctagaagtaatg
aatgatgaaagtaatcgaggatattgggatgttgtttggagtccacctgatagtgttaag
actaaaggaaccttggaaagacttggtgggacaggttgtgaagttatagttgaaaccgag
gatcaagttgaactctcgttctcaagaacatggaattcttcccttgaaggcaaattagtc
cctcttaaaatcgacaaaaggtatattttgctccgtgggtcgtcaggcttttacacctat
gcaatttacgaacatttagaagaatggccgagtttcaatcttgataatacaagagttgct
ttcaagcttagaaaagacaagtttcattatatggcaaattctgatgaccgacaaaggaaa
atgccttcaccagatgatcgattgcccggaagaggggaagaattagcataccctgaggca
gtcctgcttgttaatcctgtggagcctgaattcacaggagaggtggatgataaatatcaa
tatgccgttgagttaaaggatcttcgagtccatggatggatatgtatggatcctctggtg
gggttctggcaaattacaccaagtaacgagttcagagtaggtggtcccatcaaaccagag
ttaaattcgcacgttggaccaacaacactcgccgttttatcaagtacacactatggtgga
agtgaattggtgctaaaatttagtgagaaagagtcatggaagaaagtctttggcccgatt
tttatatacctcaatactatttcggatggagaagaccctcatacgctttgggatgatgcc
aacaaccagatgtccacagaagtcaaacattggccatatgactttgtcacttcaaatgaa
ttccaatcagctcaacaacggggttctgttagtggtagattactggtccaagataggttt
ataagtagtggtgattgtatatctgcaaatggcgcttacgttgggttagcaccaccaggt
gacgtaggatcatggcaaagagaatgcaagaaataccaattctggaccgaaacaaatgag
gaaggttattttactataaagaacgtaattatcggtgaatacaatctatatggttgggtc
cctggatttattggggactatcataattttacaattatcaatatcacttcaggagtaaat
attaatatgggtgatctgatatacgagcccccaagagctggtccaaccttatgggagatc
gggtttccagatcgtttggcagcagaattttacatccctgatcctgacccaaaatatgcc
aacagttttcttctcaataaatctaacaggtttagacagtacggtttatgggacagatat
caagagatatatccaaacgacgatttagtttatacagttggagagagtgattatacgaaa
gatttcttctttgcccatgttctcaggacaaatggtatgaacaaatatgacaagacaaca
tggacactcaaatttaaccttaacactgtgaacgagagtgaaacatatatacttagatta
gcccttgcgtccgtacatcagtctaatttgcaggtacgtgttaatgatttaaacacaagc
tctttgttttctactgggataatcggtggagacaatgcaatagcaagacatggaatacac
ggtatatattggttattcaatatcgagataccaggcatctgtttatactctaatggagaa
aattcaatctacttaacacaagtacacaatgagagtcgttttcaaggggtaatgtacgac
tacattcgtttagaagcacctttgacttccattataaacaaaatctcttag
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