Erigeron canadensis (horseweed): 122607620
Help
Entry
122607620 CDS
T07610
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03082
ATP-dependent chromatin remodeling
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122607620
03083 Polycomb repressive complex
122607620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122607620
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122607620
Histone modification proteins
HAT complexes
HATB complex
122607620
HDAC complexes
Sin3A-HDAC complex
122607620
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122607620
PRC2.2
122607620
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122607620
Heterochromatin formation proteins
Other heterochromatin formation proteins
122607620
Chromatin remodeling factors
NuRD complex
122607620
NuRF complex
122607620
NuRF complex (fruit fly)
122607620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
WD40_RFWD3
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
122607620
NCBI-ProteinID:
XP_043636571
LinkDB
All DBs
Position
7:complement(1403916..1411441)
Genome browser
AA seq
460 aa
AA seq
DB search
MNPEKAAGAGVRQLPVDERYSQWKYLVPILYDWFANHNLLWPSLSCRWGPQLERATYKNR
QRLYLSEQTDGSVPNTLVIANCEIVKPRVAAAEHISQFNEEARSPYVKKYKTIIHPGEVN
RIRELPQNNNIVATHTDSPDVLIWDVESQPNRHAVLGATESRPDLILSGHQENAEFALDM
CRSEPFVLSGGKDKSVVLWSIHDHVSTLATQPNGNKSPKTDGSDDKRTESPVIQARGVFQ
GHNDTVEDVQFCPSSTQEFCSVGDDSCLILWDARTGSSPVVKVEKAHNADLHCVDWNPID
ENLILTGSADNTIRLFDRRNFTANGVGSPIHIFENHTAAVLCVQWSPDKASVFGSSAEDG
ILNIWDHNKIGELSNSSPKIAEGLLFRHSGHRDKVVDFHWNLHDPWTIVSVSDDGESTGG
GGTLQIWRMIDLIHRPQQEVITELDKFRSHILSCPSDKAS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggaaaaagccgccggcgccggagtacgacagttgccggtggacgagcgatac
tcacagtggaaatatcttgttccgattttatatgactggtttgctaatcataaccttctt
tggccttctctttcttgcagatggggaccgcagttagagcgagctacttacaagaatcgt
caacgactctacctctcagagcagaccgatggcagtgtaccaaatacacttgtgatagca
aattgtgaaattgttaaacctagggtagcagctgcagaacacatatcacagttcaatgaa
gaagcacggtcaccttatgtgaagaagtataaaaccattatacatcccggagaggtaaat
cgtatcagggagctgcctcagaacaacaacatagtagctacccacactgacagtcctgat
gtccttatttgggatgttgaatctcagcctaatcgccatgctgtcttgggagccaccgag
tcgcgaccggatttgatcttgtctggtcatcaagaaaatgctgaatttgcccttgacatg
tgccgaagtgaaccctttgtactatctggaggcaaggacaagtcagttgtcttgtggagt
attcatgatcatgtatctacattggcaacacagcctaacggaaacaagagcccaaagact
gatgggtctgacgataagcgtactgagagccctgttattcaagcaaggggtgtcttccaa
gggcataatgatactgttgaagatgtgcagttctgcccctctagtacacaagaattctgt
agtgttggtgatgattcatgtcttatcctgtgggatgcaagaacaggctcttctccagtt
gtcaaggttgagaaagcacacaatgctgatcttcattgtgttgattggaatccgatagat
gaaaatcttatattgacggggtctgctgataacactattcgattgtttgatcgtcggaat
ttcactgctaacggggttggatcacccatacatatatttgaaaatcacactgctgctgtt
ctttgtgtgcagtggtctccggacaaagcatctgtttttggtagttcagcagaggatgga
atcttgaacatctgggatcataataagattggcgaactctctaattcttccccgaaaatt
gccgaaggcttattgttccgccattctgggcacagggacaaggtggttgattttcactgg
aacttacatgatccatggacaattgttagcgtctctgatgatggtgaaagtactggtggg
ggtggaactttacagatatggaggatgattgatttaatacatcgtccacaacaggaggtt
attaccgagctggataaattcagatctcacattctctcttgcccctctgacaaggcttca
tag
DBGET
integrated database retrieval system
