Erigeron canadensis (horseweed): 122607745
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Entry
122607745 CDS
T07610
Name
(RefSeq) oligoribonuclease-like isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122607745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122607745
03009 Ribosome biogenesis [BR:
ecad03009
]
122607745
Messenger RNA biogenesis [BR:
ecad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
122607745
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
RNases
122607745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
122607745
NCBI-ProteinID:
XP_043636709
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Position
7:complement(31832487..31836581)
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AA seq
199 aa
AA seq
DB search
MTRNRKDKGSRQSIKEPYKLPLVWIKLETTGLNVEVDRILEIACMVTDGKLRELVEGPDL
FIHQTKESLDKVGEWCQDQHAGGMTKKVRQSAISEQEAEEQVIDFVKRHVIGYTPLLAGN
SVYVDLMFLQKYMPRLACLFSHVLVDVSSIMALCCRWFPEDKKAPRKEKKPLAIDDIKDS
IVELKHYKEHVFKSSKSKR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaatagaaaggataaaggcagtcgtcaaagcataaaagaaccctacaagttg
cctcttgtgtggatcaaattagaaacgacgggcttgaatgttgaagtagatagaatcttg
gagattgcttgcatggttacagatggaaagttgagagaactggttgagggtcccgatttg
ttcattcatcaaacaaaagaatctcttgataaagtgggagaatggtgccaagatcagcac
gcaggtggtatgaccaagaaggtgagacaaagtgcaattagtgaacaagaagctgaagaa
caggttatagattttgtgaagagacatgtcattggatatactccgttgcttgcaggaaat
tcagtttatgttgacttaatgttcttgcagaaatacatgcccagattggcttgtcttttc
tctcacgttctcgttgatgtcagcagtatcatggctttatgttgccgttggttccctgaa
gataagaaggcacctcgaaaggagaagaagcctctagccatagatgacatcaaggatagc
atagtggagctcaaacactacaaggaacatgtattcaaatcatcaaagtcaaaaaggtaa
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