Erigeron canadensis (horseweed): 122607786
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Entry
122607786 CDS
T07610
Name
(RefSeq) ribosomal RNA small subunit methyltransferase I
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122607786
Enzymes [BR:
ecad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
122607786
Ribosome biogenesis [BR:
ecad03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
122607786
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
PucR
DUF3253
Motif
Other DBs
NCBI-GeneID:
122607786
NCBI-ProteinID:
XP_043636769
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Position
7:complement(10275333..10281601)
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AA seq
343 aa
AA seq
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MLRLTISRLPAPFSITCQIPFAAPLFTLSTRRRFALFYCSDSQADSTLQLSSKQGNLKSG
LYLVGTPIGNLEDITLRALRVLKSADVILAEDTRHSGKLLQHYNIKTPLLSYHKFNEAQR
EQSILKRLIEGEIIALISDAGTPGISDPGSELAKLCVEANVPVIPIPGPCAFVAALSASG
LSTTEFAFVGFLPKNASARRDRLMVSSNEAATQIFYVPPHKLSQFLEETSSLFGELRRSV
MAREITKMHEEFWRGTLREAKAAFLDRQPKGEITFLIEGKPHCEIETPTEAQLENDLAEL
ISNGHTLSEAVKLVAAGSSMKRKVIYSLALRKFGKYDVVDDVD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggttgacgatatcccgtttgccggcgccattttccatcacttgtcaaatacca
tttgctgcaccgctattcaccttatctacacgacgacgttttgctctgttctattgctcc
gactcacaagctgattctactctacaactttcttcgaaacagggaaatttgaagtcagga
ttgtatctagttggaaccccaattggaaatcttgaagatatcacattaagagctctgcga
gttttgaaatcagcagacgtgatacttgctgaggatacaagacattcggggaaattgctt
caacattacaacattaaaactcctctactgagctatcataaattcaacgaggcacaaaga
gagcaatcgatattgaagagattgattgagggtgagattatagcacttatcagtgatgct
gggacaccgggaatcagcgatcctggctccgaactggcgaagttgtgtgtggaggcaaat
gttccggtcatacccatacctggaccttgtgcatttgtggctgctctttcagcctcgggt
ttgtccacaactgagtttgcatttgttgggtttcttcccaaaaatgcaagtgctagaagg
gataggctaatggtttcttcaaatgaagcagccactcaaattttctatgttcctccacat
aagctttcacaatttcttgaagaaacttcatctctttttggtgaacttaggcgatctgtg
atggctcgagagatcaccaaaatgcatgaagagttttggcgaggcactctaagggaagcc
aaagcagcattcttagatcgccaaccgaagggagaaatcacatttttgattgaaggcaag
ccgcattgtgagattgaaactccaacggaagctcaactggagaatgatttggcagagcta
atctccaacggccatactctctctgaagcagtcaaattggtagctgcaggatcgtcaatg
aagagaaaagtgatatattcattggccttgagaaaatttgggaaatatgatgtggtggat
gatgtagattga
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