KEGG   Erigeron canadensis (horseweed): 122607843
Entry
122607843         CDS       T07610                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03060  Protein export
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    122607843
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecad02044]
    122607843
Enzymes [BR:ecad01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     122607843
Secretion system [BR:ecad02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   122607843
  Eukaryotic Sec-SRP protein
   122607843
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW ResIII AAA_33 nSTAND3 AAA_19 AAA_22 nSTAND_NTPase5 Zeta_toxin SRPRB AAA_17 Fe-ADH MMR_HSR1 CLP1_P ATP_bind_1 nSTAND_NTPase7 AAA_16 ATPase AAA_30 Methyltransf_24 APS_kinase
Other DBs
NCBI-GeneID: 122607843
NCBI-ProteinID: XP_043636839
LinkDB
Position
7:2799214..2804590
AA seq 495 aa
MVLAELGGSISRALQQMSNATIIDEKVLTVCLNDITRALLQSDVQFLLVKKMTDNIKNIV
NLEDLAAGHNKRKIIQQAIFNELCKMLDPGKPAFTPKKNKPSVVMFVGLQGSGKTTTCTK
YAYHHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYLESDPVKIAVEGVQRFK
EEKCDLIIVDTSGRHKQEVALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDL
SGFMDKIQEVVPMDQQPELLQKLQEGNFTMRIMYDQFQNLLKMGPINQVFSMLPGFSSEL
MPKGREKESQAKIKRYMTMMDSMTNEELDSTNPKLMNESRIMRIARGAGRQVREVMEMFE
EYKRLAKIWGKMKGLKIPKKGDMSALSRNMNVQQMSKVLPPQMLKQIGGMGGLQSLMKQM
GSSKDMMGMFGGGDK
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggtgttagcggagctaggagggagcatatcacgtgctctacagcagatgagcaatgca
acaattatagatgaaaaagttttaactgtttgtttgaatgacatcactcgcgctcttctt
caatctgatgtccagtttcttctcgttaaaaaaatgactgataatattaaaaatatcgtt
aatctcgaggatcttgctgctggtcataataaacgtaaaatcatccaacaggctatattc
aacgagctttgcaagatgttagatcctggaaagccagctttcacgcccaagaaaaacaaa
ccaagtgttgttatgtttgtcggtctacaagggtccggtaaaacaaccacctgtacaaaa
tacgcatatcatcaccagaagaagggctggaaaccggctcttgtttgcgcagatacattc
agagctggtgcttttgaccagctaaaacaaaatgcaactaaagccaagattccgttctat
ggaagttatttggagtcagaccctgtgaagattgcagttgaaggtgttcagaggttcaag
gaggagaaatgtgatctgattattgttgacacaagtggtcggcataaacaagaagttgcg
ctctttgaagagatgcgtcaagtcgctgaagcaacgaaaccggatcttgttatctttgtc
atggatagcagtattggtcaagctgcatttgatcaagctcaagcgtttaagcagagtgtt
gctgttggagctgtcattgttactaaaatggacggccatgctaagggaggtggagctctt
agtgcagttgcagcaacaaaaagcccagtcatattcattggaactggtgaacatatggac
gagtttgaagtttttgatgttaaaccgtttgtcagtcgtcttttaggtatgggtgacctg
tctggcttcatggacaaaattcaggaagtcgttcctatggatcagcagcccgagcttctt
caaaagctccaagaagggaatttcactatgcggattatgtatgaccaatttcagaacttg
ctcaaaatgggtcctatcaaccaggtattctcaatgcttccaggatttagctcagagttg
atgcccaaaggccgtgaaaaggaaagccaagcaaagatcaaacgatacatgacaatgatg
gattcaatgactaatgaagagttggatagcaccaacccaaaactcatgaatgaatccagg
atcatgcggatagccagaggtgctggtcgtcaagtgagggaagtcatggaaatgtttgaa
gaatataaacgactcgccaagatttggggcaaaatgaagggtcttaaaatccctaaaaag
ggagacatgagcgcattatctagaaacatgaacgtacaacagatgagtaaggtccttcct
ccacaaatgctaaagcagattggtggcatgggcggattacaaagtttaatgaaacaaatg
ggttccagcaaagatatgatgggcatgtttggtggtggtgacaaatag

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