Erigeron canadensis (horseweed): 122607925
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Entry
122607925 CDS
T07610
Name
(RefSeq) serine/threonine-protein kinase RIO1-like
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122607925
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecad01001
]
122607925
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122607925
Enzymes [BR:
ecad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122607925
Protein kinases [BR:
ecad01001
]
Serine/threonine kinases: Other
RIO family [OT]
122607925
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-40S particles
Kinases
122607925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
TCAD9
Pkinase_fungal
APH
Motif
Other DBs
NCBI-GeneID:
122607925
NCBI-ProteinID:
XP_043636934
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Position
7:complement(4439922..4448781)
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AA seq
568 aa
AA seq
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MEQETNLKIETQNHPSNFKHEIVNDQHLEIKEFEEEFDEEEEEEEELSWSSDSEIGEALD
YLDTQNDTVSLDGSLILNARRPNAHGGVHSRPNASPLQPLSNRNQKFTNHIRASPLEEWE
GRWNSGMSNSVTTAIRESVRGMAIGKTKTTEKADRATVEQAIDPRTRMVLFKMLNRGVFH
DINGCISTGKEANVYHATKSDGQELAIKVYKTSVLVFKDRDRYVQGDYRFRYGYCKHNPR
KMVKTWAEKEMRNLMRLKAAGIRCPTPLLLRLHVLVMEFIGTTGWAAPRLKDAALSLDKL
REGYFEMVTTMRVLYQKCKLVHGDLSEYNILFHEGHMYIIDVSQSVDLDHPHALDFLRED
CVHVSDFFKKHGVAVMTIRELFDFIVDPSIDEDSVDSYLEEAQQKVLARGDKISAEDEIA
DAVFVQSYIPKTLDNVKNAEADVIRLTSGQDTGDMYYQTITGLKHAISIEQQHQEASLQQ
EPPKDPTQHSNSQDHESQTESDEDNSDDSEDDDGSSFDNDKLTPSEKKAARKENKKKVKE
EKREARKTKVPKAVKKKKKKLAKAKKTR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaaaccaacctcaaaatcgaaactcaaaaccacccatctaatttcaaacac
gaaatagtcaacgaccaacatcttgaaattaaagaatttgaagaagaatttgatgaagaa
gaagaagaagaggaggaactttcatggtcatcagattcagaaatcggagaagcattagat
tacttagacacccaaaacgacaccgtttcacttgacgggtctttgattcttaatgccaga
cgtccaaatgctcatggaggagttcattcccgtcctaatgcttcgccccttcaaccgctt
tcgaaccgaaaccaaaagtttactaatcatattagagcttcccctttagaggagtgggaa
ggaaggtggaatagtggcatgtcaaattctgttactactgccattcgtgagagcgtgcga
ggcatggccattggtaagactaaaactactgaaaaggctgatcgagcaactgttgaacag
gcaattgaccccagaactcgcatggttttgtttaaaatgttgaatcgaggtgttttccat
gatatcaatggctgcatttcaactgggaaggaggcaaatgtatatcatgctacaaaatct
gatggccaggaacttgcaataaaggtctacaagacatctgttcttgtgttcaaggataga
gatcgctatgtccaaggtgattatcggttccgatacggatattgcaagcacaaccccagg
aaaatggtgaagacttgggctgagaaggaaatgaggaatcttatgcgacttaaagcagct
ggaattcgttgccccactccccttcttttaaggcttcatgttctggttatggagttcata
ggcacaacaggttgggctgcacctcgacttaaagatgctgcattgtctctagacaagcta
cgggaaggttattttgagatggtaacaacgatgcgggtgctgtatcaaaagtgcaagcta
gtacatggagaccttagcgagtataacatacttttccacgagggtcacatgtacattatt
gatgtatctcaatctgtcgatcttgatcatccgcatgcattggatttcttgagagaggat
tgtgttcatgtatctgatttcttcaagaaacatggagtagctgttatgactattcgtgag
ttgttcgattttattgttgacccatcaatagacgaggattctgtcgacagctacttggag
gaggctcaacaaaaagttttggccagaggagacaagatatctgcagaggatgaaattgca
gatgctgtttttgttcagtcatacattccaaagacattagataatgtaaaaaatgctgag
gcggatgtaatacgtctaacgagtgggcaagacacaggagacatgtactatcaaaccatt
acagggcttaaacatgccatctcaattgaacaacaacatcaggaagcaagtcttcaacaa
gaaccccctaaggatccaactcaacattctaattcacaagatcatgaatcacaaaccgaa
tcagatgaagataactctgatgattctgaagatgatgacggatcttcttttgataatgat
aaactgacaccttcggagaaaaaagcagctagaaaagagaataagaagaaagtaaaagaa
gagaaaagagaagcgcggaagactaaagtgccgaaagctgtgaagaagaaaaagaagaag
ttggcgaaagcaaagaagacccgttag
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