Erigeron canadensis (horseweed): 122607950
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Entry
122607950 CDS
T07610
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122607950
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122607950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
AKAP28
zinc_ribbon_16
DUF5816
Motif
Other DBs
NCBI-GeneID:
122607950
NCBI-ProteinID:
XP_043636969
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All DBs
Position
7:complement(26626480..26628501)
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AA seq
525 aa
AA seq
DB search
MSCCKNCKSKALTTDPHTGNLECTSCGVVQHSTTYDQQTYNRDGPTGHNIRLGTSGSRYD
YSYHETKIYLAQKIVSDILLKLELENRFDEVNNMIKEITDNEYGSGRWFSVLVGACVYVV
MRKAKKWMPLGSICENVGCDGYELGRMVSRVVEHLEIRLPDGDIVGLFERVVKEMGVGRE
KVGRVLKQGVFLLQCMVKWYVTTGRRPVPVVVAVVVFVCEVNEVEVSVEDLAEKLNVNVT
TCKLRYKEVLERLVDVGRGNLPWGENVNVKNVMKNAPMIIQYMEMKSMCSGGGRKKDVSL
VEGVGLVLDGLIKDCLDGGDDGRFFAEGFYAGDDDGDRSRGGRVNWEVEDLEKLKVSHEC
LSKIYLKFLDEYTSMKASMGTVERVGSGKSFLFLDMPEYWTGNSEMSKKLFLDQILEKDV
GLNVMPPSFVKGCLKTKRRKEKIKAAKIRIEKIRRPWMTANDSDELCVQNAVISKKRKKR
AKKADTDWEDFVIETLLLHQVKEEEIEKGYYNTLLDLHVVNSAFR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgttgcaagaactgcaaatcaaaggccttaacgacagacccacatacaggaaac
ctagaatgcacatcatgcggtgtcgtacaacactcgacaacctacgaccaacaaacatac
aatcgagacggacccacgggtcacaatatccggttaggtacttccgggtcaaggtatgat
tattcttatcatgaaaccaagatttatttagcccagaaaatagtttctgatattttgttg
aaattagaattagaaaatagatttgatgaagttaataacatgattaaggagattacggat
aacgaatacggttcgggtagatggttcagtgtacttgttggtgcttgtgtttacgttgtt
atgcgaaaagcgaaaaaatggatgccgttagggagtatttgtgaaaatgtggggtgtgat
gggtatgagttaggtagaatggtgagtcgggttgtggagcatttggagatacggttgccg
gatggggatatagtcgggttgtttgaacgggttgtgaaggaaatgggtgtagggagggag
aaagttgggagggttttgaaacaaggggtgtttttgttgcaatgtatggtgaagtggtat
gtgacgacggggagaaggccggtgccggttgtggtggcggtggtggtttttgtttgtgaa
gtgaatgaggttgaggttagtgtggaggatttggcggaaaagttgaatgtgaatgttaca
acgtgtaagttgaggtataaggaggtgttggaacggttggtggatgttgggagaggaaat
ttgccgtggggtgagaatgtaaatgttaagaatgttatgaagaatgctccaatgattatt
cagtatatggagatgaagtcgatgtgtagtggtggtgggaggaagaaggatgtgagtttg
gtggagggtgtcggtttggttttggatggtttgattaaggattgtttggatggtggagac
gatggaaggtttttcgctgaagggttttacgcgggtgatgacgatggtgataggtcacgg
ggtggcagagtgaattgggaagttgaagatttggagaagcttaaggtttcgcacgaatgt
ttatcgaagatttacttaaagttcttggatgagtatactagtatgaaggcatcaatgggg
accgttgaacgtgttgggagcggcaagtcttttcttttcttggatatgccggagtattgg
actgggaactcagagatgagcaaaaagctttttcttgatcaaatattggaaaaagatgtt
ggattgaacgttatgcctccgtcttttgttaagggatgtttgaaaacaaaaaggagaaaa
gaaaagatcaaggctgctaagatacgcattgagaagataaggcgaccatggatgactgca
aatgatagtgatgagctctgtgtacaaaatgctgtgatttctaaaaagagaaaaaaacgg
gcaaagaaagctgatactgattgggaagattttgttattgaaactctgttacttcatcag
gtgaaagaagaagaaatagagaaaggttactacaataccttgttggatcttcatgttgtc
aactctgctttcagatag
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