Erigeron canadensis (horseweed): 122608141
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Entry
122608141 CDS
T07610
Name
(RefSeq) mRNA-capping enzyme-like isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122608141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122608141
Enzymes [BR:
ecad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
122608141
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
122608141
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
122608141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Tc-R-P
PTP-SAK
PTP-NADK
Y_phosphatase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
122608141
NCBI-ProteinID:
XP_043637165
LinkDB
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Position
7:35176680..35187515
Genome browser
AA seq
698 aa
AA seq
DB search
MDLNASPSPEEDDSIHVNTLNYQLAGRERVTGFENMNQERANGGSKRRYMEVDSMHMSRP
SKRSHGFQSGNNGSYDRNSLPPGWLDCPPYGDAISFIIPSKVPLGESFNDKIVIDKLYSP
QLAIREQRRLGRELGLVIDLTNTNRYYPESDWTRECIKYVKIRCAGRDAVPDSESVEKFI
QEVTRFSSQHTRSNKYVLVHCTHGHNRTGYMIVHYLIQSESLSVTEAISRFYEARPPGIY
KQDYIDDLYNFFGEQKPETFVCPPTPEWKRSPDQDDDATAGLQDYDVQASEMRNVFGSGE
MANVAGGGEMSNALGGSEMTHAMGYSKMTNDDILGGNVPYNQIESMRHFCNQALKLSVRG
RGKPQFPGSHPVSLSRDNLQLLRQRYYYATWKADGTRYLMLITWNGCYLIDRNFNFRSVE
LRFPCGNVNEGAAGNTHNYTLLDGEMIIDTDPSTHKQERRYLIYDLIAINKTSLVDHPFS
SRWMILENEVIKPRNRERDRLFQSRNPYYRYDLEPFRVRRKDFYLLSAVPKLLKEFIPHL
SHESDGLIFQGWDDPYVPRTHEGLLKWKYPELNSVDFLFELGNNNRHMICLNERGRRKPM
DGSRVVFRDPSVDVFSLSGKIIECSWDSEEDVWVFMRMRPDKSTPNEFITFKKVMRSIKD
NITEEVVLNEIHDIIRLPMYADRIRSDCKTFEKNGRRK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaatgcatccccgtcaccagaggaagatgactcgatacatgtgaacactttg
aattatcagcttgctggacgagagagagtgacaggatttgagaacatgaaccaagagaga
gcaaatgggggatctaaaagaagatacatggaagttgactcaatgcatatgtcccggccg
tctaagcgtagtcatggattccagagtggaaacaatggatcatatgaccggaatagtctt
cctccaggttggttggactgccctccatatggggatgcaataagcttcattatcccttca
aaagttcctcttggagagtcttttaatgacaaaattgtcattgataaactatattcgcct
caacttgcaattcgtgagcaaaggcgtttagggagagaactagggttggtaatagatctg
acaaacaccaatcgatactatcctgagtcagattggacgagagaatgtattaaatatgtt
aagatcaggtgtgcaggaagggatgcagtacctgatagcgaatctgtagaaaaattcatt
caggaggtgacccgtttcagctcccaacatactcgatcaaataagtatgtccttgtccat
tgtacacatggccataacaggacaggttatatgattgttcattatcttatacagtcagaa
tcactttccgtcacagaggcgataagcagattttatgaagcgcgtcctccgggaatttac
aaacaagattatattgacgatctatacaatttttttggtgaacaaaagcccgagaccttt
gtttgccctccaaccccagaatggaagaggtcacctgatcaggatgatgatgcaactgct
ggtttgcaggactatgatgtgcaagcaagtgagatgagaaatgtttttggatcaggtgag
atggcaaatgttgcgggaggaggggagatgtcaaatgctttgggaggaagcgagatgaca
catgctatgggatatagtaagatgacaaatgatgacatattgggaggtaacgtgccatat
aatcagatagagtcaatgagacatttttgcaatcaagctctcaagttgagtgtacggggc
cgaggaaaaccgcaatttccagggtcacaccctgtttctcttagcagggataatttacaa
ctcctgaggcagcggtactactatgccacatggaaagctgacggaacacgatatttgatg
ttaataacttggaatggatgttatctgattgatagaaatttcaatttccgtagtgttgaa
ttgcggtttccatgtggaaacgtgaatgagggtgcagctggaaatactcataactacacc
ttacttgatggagaaatgataattgatactgacccgagcacacacaagcaggaaagaaga
tatctgatttatgatctgatagcaatcaacaaaacatcacttgtagatcatcctttcagt
agcaggtggatgatacttgagaatgaagttatcaaaccacggaacagggaacgagaccgc
ttgttccagagtagaaatccgtactacagatatgacttggaaccatttagggtgagacgg
aaagacttttatctactttctgctgtccctaagcttttaaaggagttcattccacacctt
tcgcatgaatcggatggtctcatttttcagggctgggacgatccatatgtgcctcgcaca
catgaaggtcttttgaagtggaagtatccagaattgaactcggttgattttctctttgag
ctaggaaacaataatcgccatatgatttgtttaaatgagcgtgggagaaggaagccaatg
gatggaagtcgggtggtttttagagatccatcagtagatgtattctcattatctgggaag
ataatagaatgttcatgggattctgaggaagatgtttgggtctttatgaggatgcggccc
gacaaatcgacaccaaatgaatttataaccttcaaaaaggttatgaggagcatcaaggat
aatatcactgaagaggttgtattaaacgagatccatgatatcattcgtctcccaatgtat
gctgacagaataagaagtgattgcaaaacctttgagaagaatggtagacggaagtag
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