Erigeron canadensis (horseweed): 122608265
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Entry
122608265 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-6-like
KO
K10357
myosin V
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122608265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122608265
04131 Membrane trafficking [BR:
ecad04131
]
122608265
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122608265
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122608265
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122608265
mRNA cycle factors
P-body specific factors
122608265
Membrane trafficking [BR:
ecad04131
]
Others
Actin-binding proteins
Myosins
122608265
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122608265
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122608265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Hpr_kinase_C
AAA_18
bZIP_2
Motif
Other DBs
NCBI-GeneID:
122608265
NCBI-ProteinID:
XP_043637284
LinkDB
All DBs
Position
7:complement(33172568..33183504)
Genome browser
AA seq
1436 aa
AA seq
DB search
MTKLAYLHEPGVLNNLRSRYDINEIYVSDRNFSFSPFLXTTYTGSILIAVNPFTRLPHLY
DSHMMAQYKGATFGELSPHPFAVADAAYRVMMNEGISQSILVSGESGAGKTESTKQLMRY
LAYMGGRAASEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDEKGRISGA
AIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEVVQRFKLGDPKTFHYLNQSNCYQIDG
LDEAKEYIATLNAMDVVGISSQEQDAIFRVVAAILHLGNIEFAKGEEIDSSMPKDEKSLF
HLKTAAELFMCDVKALEDCLCKRVMATRDETITKWLDPESAAVSRDALAKVAYSRLFDWL
VDKINNSIGQDSSSKYIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQE
EYTKEEINWSYIEFIDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFSQKLYQTFKNH
KCFAKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLSASKCFFVSGLFPKS
SEESSKSSKFSSIGTRFKQQLQQLLETLSSTEPHYIRCVKPNNLLKPAIFENQNVLQQLR
CGGVLEAIRISCAGYPTRKAFDDFVDRFGILAPEILNRSTDEVAACKTLLEKIGLEGYQI
GKTKVFLRAGQMAELDARRTEVLGRSATIIQRKVRSFMARKSFVLMRRSVLQIQSVCRGQ
LARQVFESMRREASCLRIQRELRMHLARKVYNELCFSALSIQTGLRGMAARNELRYRRQT
KAAIIVQSHFRKFLARLQFKKFKKAAITTQCAWRGKVARGELRKLKMAAKETGALQAAKN
KLEKQVEDLTWRLQLEKRIRADLEEAKTQENGKLQSALQDMEIQLKETKELLMKERETTK
AIAEVPLIQEVPVVDHELMNKLTAENEKLMDLVTSLEKKMGDTEKRYEETNKLSEERLKQ
ALEAETKIIQLKTAMQSLQEKVSDMTSENQILRHQVFSSPIKGVPESFHTQETKEPDTPA
MSLVTKSHSKPKKPPVDNQQEHIDALIECVMKDTGFSQGKPVAAFTIYKCLIHWKSFESE
KTSAFDRLIQMIGSAIENQDNNDHLAYWLSNTSTLLFLIQRSLKPDGASSAQKPPTPTSL
FGRMMGFRSSSISVAAAAAALEVVRQVEAKYPALLFKQQLTAYVEKMYGIIRDNLKRELG
SLIALCIQAPRTSKAVLRSGRSFGKDSQSNHWQGIVDCLNTLLNTLKENFVPPIIVQKIF
TQVFSYINMQLLNSLLLRRECCTFSNGEYVKAGLAELEMWCSQVKEEYAGSAWDELKHIR
QAVGFLVIHQKYRISYDDITNDLCPVLSVQQLYRICTLYWDDNYNTRSVSQDVISSMRVL
MTEDSNTAVANSFLLDDNSSIPFSVDDLSTSLQVKDFSDVKPAVELVKNPAFLFLL
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagttggcatatttgcatgaacccggggttctaaataacttgcgttctagatat
gacattaatgagatatatgtgagtgatcggaatttctctttttctcccttcctataaaca
acatatacagggagcatattgatagctgtaaatcctttcacacgattaccgcatttgtat
gatagccatatgatggcgcagtataaaggtgcgacatttggggagttgagtccccaccct
tttgccgttgctgatgctgcatacagagttatgatgaatgaaggtataagccagtcgata
ttagttagtggagagagcggagctggtaaaacagaaagcacaaaacagctaatgcgctat
cttgcttacatgggaggtagagctgcatctgaggggaggagtgtcgagcagaaagtcttg
gagtccaaccctgtactagaagcttttggtaatgcaaaaactgtgagaaacaataactca
agtcgttttggaaagtttgtggagattcaatttgatgaaaagggaaggatttcaggcgct
gctattagaacatacttactggaaaggtctcgtgtttgtcagctatcagatcccgagagg
aattatcattgcttctacatgctttgtgccgcaccccctgaggttgttcaaagattcaaa
ttgggcgatccaaagaccttccattatttaaatcagtcaaattgctaccagattgatggt
ttagacgaagcaaaagaatatattgccacactgaatgcaatggatgttgtaggaattagt
tctcaagaacaggatgcaatttttagagtcgtggctgcaattcttcatctggggaacata
gaatttgcaaagggagaggaaatagactcgtctatgcctaaggatgaaaaatctctgttt
cacttaaagactgctgctgagttattcatgtgcgatgtgaaagctctagaagattgccta
tgcaaacgtgtcatggcaacacgtgatgagaccatcacgaaatggttggatccagaatct
gctgctgtcagcagagatgctttagcaaaagttgcttactcgaggctatttgactggctc
gtagataagatcaataattcaattggtcaggactcaagctcaaagtacataattggagta
ttggacatatatggattcgagagtttcaaaacaaacagctttgagcagttttgcatcaac
ttgacaaacgaaaaacttcaacaacatttcaatcagcatgtcttcaaaatggagcaagaa
gaatatacaaaagaagaaattaattggagctacatcgagtttattgataatcaagatatc
ctagatctcattgagaagaaaccgggtggcattatagctcttttagacgaggcttgtatg
tttcccaggtcaacacatgaaacattctcgcagaagttgtaccaaacttttaagaaccac
aagtgttttgccaaaccaaaattggcacgctctgacttcacgatttgtcattatgctggt
gatgtcacatatcaaaccgagttgtttttagacaaaaacaaagattatgtcattgctgaa
catcaggccctcttgagtgcatcaaaatgtttctttgtgtctggattgttcccaaagtca
tctgaagagtcctctaagtcatcaaagttctcctcaatcggtacacgtttcaagcaacag
ctgcaacaattgcttgaaactttgagctcaactgagcctcattatattcgttgcgtaaaa
cctaacaatcttcttaagcctgctatttttgaaaaccaaaatgttctacagcaactgcga
tgtgggggagtattggaggcaattaggatcagttgtgctgggtaccccactagaaaagca
tttgacgatttcgtggataggtttggcatcctggctcctgaaattttgaatagaagtacg
gatgaagttgctgcgtgcaagacgcttttggagaaaattggactcgaaggctatcagatt
gggaaaacaaaggtgtttctaagggccggtcaaatggcagagctggatgctcgccgaact
gaagttttaggaagatcagctactattattcaaaggaaagttcgttcttttatggcccga
aaaagttttgtattgatgcgtcgttctgtcttgcaaattcaatctgtctgccgaggacaa
cttgctcgacaagtttttgagagcatgcgtagagaagcttcttgtttgcggattcagaga
gagttgcggatgcatcttgctagaaaagtttacaatgaattatgtttctctgctctttct
atccaaacaggtttacgaggaatggctgcacgtaatgagcttcgttatcgaaggcagaca
aaagcagcaatcatcgttcagagccattttcgcaagttcttggcccgcttgcagttcaag
aagtttaagaaagctgcaattactacacaatgtgcatggagaggaaaagttgcccgtggt
gaacttcggaagcttaagatggctgcaaaagagactggtgctttacaagctgcaaaaaat
aaactagaaaagcaagttgaagatcttacttggcgactacagctggagaagcgcataagg
gctgacctggaagaagccaaaacgcaagaaaatgggaaattacaatctgctttgcaagat
atggaaattcagctaaaagaaactaaagaactgctcatgaaggaacgtgaaaccactaag
gcaatagcagaagttccactcatccaggaggtcccagttgtggaccatgaactcatgaat
aagcttactgctgaaaacgagaaactcatggatttagttacttccctggagaagaaaatg
ggtgataccgagaagagatacgaagagacaaacaaactcagtgaggagaggttgaagcaa
gctttagaggctgagacgaaaattatccagttaaagactgctatgcagagtcttcaagaa
aaggtttctgacatgacatctgagaaccaaattcttcgacatcaagtattttcgtcacct
attaaaggcgttccagaatcctttcatactcaagaaactaaagagcccgatacacctgct
atgagtttggtgactaaatctcacagcaagcctaaaaaacctccagttgataatcaacaa
gagcacattgacgcccttatagagtgtgtcatgaaagacactggattcagtcaaggcaaa
cctgttgcagcttttaccatctacaaatgccttattcattggaaatcttttgaatctgaa
aaaactagtgcatttgaccgacttattcagatgattggttcagcaattgagaatcaagat
aataatgatcatttagcatattggttatcaaatacgtccactttgttgttcttaatccaa
agaagtttaaaacccgatggtgcaagttcagctcagaaaccaccaactccaacttcacta
tttggaagaatgatgggattccgttcatcttctataagcgttgctgcggctgcagctgca
cttgaggtagtacgtcaagttgaagccaaatatccagctttacttttcaagcagcaactt
acagcatatgtagagaaaatgtatggcattattcgtgacaacttgaaaagggagttgggg
tcattgattgccttgtgtattcaggctccacgaacatccaaggcagtgctaagatctgga
cggtccttcggcaaagattctcaatccaatcactggcaaggcattgttgattgtctcaac
actcttctaaacacattgaaagaaaactttgtgcctcccataattgttcagaagatattt
actcaagttttctcatatatcaatatgcagctccttaacagtcttcttctgcgccgggag
tgttgtaccttcagcaatggggaatatgtgaaagctgggttagccgagttggagatgtgg
tgttctcaagtaaaagaagagtatgcagggtcagcttgggatgaacttaagcatattaga
caggctgttgggttcttggttatacatcagaagtataggatatcatacgatgatatcacc
aacgatctgtgccctgttttaagtgtccagcaactgtatagaatatgcactctttattgg
gacgataattacaacactcgaagtgtatcccaagacgttatttcaagcatgagggtactg
atgacagaggactccaacacggctgtcgctaattcctttctgctagatgataattccagc
atacctttctcggttgatgacctctctacttccctccaagttaaagacttctcagacgtg
aaacctgctgtagaacttgtcaagaatccggcctttctgtttttactatag
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integrated database retrieval system
