Erigeron canadensis (horseweed): 122608297
Help
Entry
122608297 CDS
T07610
Name
(RefSeq) LEC14B protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122608297
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122608297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_IFT122_1st
WDR54
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122608297
NCBI-ProteinID:
XP_043637322
LinkDB
All DBs
Position
7:complement(35476022..35486663)
Genome browser
AA seq
489 aa
AA seq
DB search
MFFRAWNTAIGDMGYALSRLEIDPDYSDSESSLVGDDHDSPRPSSQNDLDHEVAQLTKIR
SAPHERLKRVLPRREEFPVSPVKMLAGREGNYSGRGRFSSADQCHLLNKYLPVKGPSTID
QLTTRAYVSQFSNDGSLFVAAFQGSHIKVYNAEMGWKLQKNIVARSLRWTITDTSLSPDK
RFLVYATMSPMVNIVNIGSAATESHANVTEIHEGLEFSGDDEGGYSFGIFSVKFSNDGKE
LVAGSSDDSIYVYDIEANKLSLRIQAHTSDVNSVCFADETSHLIYSGSDDNLCKVWDRRC
FRSKGKPAGILVGHLEGITHLDSRNDGRYFISNGKDQTIKLWDIRKMSPNAIHTPGFRNY
EWDYRWMDYPLRARDVKHPNDQSVSTYKGHSVLRTLIRCYFSPEYSTGQKYIYTGSHDSC
VYVYDLVSGAQVARLVHHKSTVRDCSWHPYYPMLVSSSFDGDIAKWEFPGNADAPIPVNT
SRPRRQHFD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttctttagggcgtggaatactgctataggtgatatgggatatgctcttagtagattg
gagatagacccggattattctgatagtgaatcttctcttgttggagatgatcatgacagt
cctcgaccttcgtctcaaaatgatttggatcatgaagttgcccagttaactaaaatcaga
tcggcaccccatgaaaggttgaaacgggttcttcctcgaagagaggagtttccagtttca
ccggtgaagatgttagctggacgagaagggaattattctggtagaggtaggttttcttca
gcagatcaatgtcatcttcttaacaaatatctaccagttaaaggtccttctacaatcgac
caattgactacccgcgcttatgtctcgcaattttcaaatgatggctccctttttgttgct
gcatttcagggaagccacattaaagtttataatgctgaaatggggtggaaacttcaaaaa
aatattgttgccagaagcttgcgctggacgattacagatacatctctttcaccagataaa
cgtttcctggtttatgcgactatgtctcctatggtcaacattgtcaatattggatctgct
gcaacagagtctcatgcaaatgttacggagatccatgaagggcttgaattttctggtgat
gatgaaggggggtattcatttggaattttttctgtaaagttttctaatgatggcaaagaa
cttgtagctggaagtagtgatgattcaatttatgtttatgatattgaagcaaacaaactt
tcccttcgaattcaagcacatacgtcagatgtaaatagcgtgtgttttgctgatgaaacc
agtcacctgatatattctgggagtgatgacaatctctgcaaggtttgggacagacgctgc
ttcagatcaaaaggaaaacctgctggaatcctggtggggcacctagaaggaattacacat
cttgatagccgtaatgatggtcgttatttcatttcaaatggaaaggatcagaccatcaag
ctttgggatatccgaaagatgtcccctaatgccattcacactcctgggttcaggaactat
gaatgggattatagatggatggactaccctcttcgggcacgggatgtgaaacatccaaat
gatcaatctgtttccacatataaaggtcattccgtattacgtacactgatacgctgctac
ttttcaccagagtatagcactggccagaagtatatctatactggttctcatgattcttgt
gtttatgtttatgatttggtgagtggagctcaagttgcgcgacttgtccaccataagtca
actgtacgagattgcagttggcacccttattatccaatgcttgttagttcttcatttgac
ggagatatcgcaaagtgggaatttcctggtaatgcagatgccccaattcctgtgaacact
agtaggccgcgaagacaacattttgattga
DBGET
integrated database retrieval system