Erigeron canadensis (horseweed): 122608470
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Entry
122608470 CDS
T07610
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122608470
Enzymes [BR:
ecad01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
122608470
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
122608470
Prokaryotic type
Methylthiotransferases
122608470
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
122608470
NCBI-ProteinID:
XP_043637510
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Position
7:complement(15224155..15237637)
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AA seq
613 aa
AA seq
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MEDIEDLLVGSQPSPPGFRLPITTAAGGAVAVGIKPTSNKKTKPPPSSHVPGTQTIFLKT
FGCSHNQSDSEYMAGQLSAFGYAISDSAEGADLWLINTCTVKSPSQSAMDTLIAKCKTAK
KPLVVAGCVPQGSRDLKELEGVSVVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLP
KVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKSVVDDGVKEIWLSS
EDTGAYGRDIGVNLPILLNAIVAALPSNGSTMLRIGMTNPPYILEHLKEIAVILQHPCVY
SFLHVPVQSGSDAVLSAMNREYTVSEFRKVVDTLTELVPGMQIATDIICGFPGETDEHFA
ETVNLIKDYKFSQVHISQFYPRPGTPAARMKKVASNVVKKRSRELTSVFESFMPYNGMEG
NIERIWITDIATDEIHLVGHTKGYVQVLVVGPESLLGSSAIVKITSVGRWSVFGDVIEIL
DQSNDIKSQTDKKDTSIQERCSPCSSQEDTCACLSKKPEPCACESQACESNGCNITLNDS
YPESPNNQNAGGNPSLSLRRKPSPAVMEMEHNDIQKLASNVHHREWGLLDRALLGGIFMS
LLTILALLFYVRS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaggatttgttggtcggaagtcagccatctccacctggtttccggcta
ccaattaccaccgctgccggaggagcagtagctgttggaatcaaaccaacttcaaataaa
aaaaccaaaccaccaccatcttctcacgtccctggcacccagaccatttttctcaagaca
tttgggtgttcacataatcagagtgacagtgagtatatggccggacagctttcagctttt
ggttatgctatcagtgatagtgcagaaggagccgatctttggctcataaatacttgtaca
gtgaagtccccaagccagtcagccatggacacattgattgcaaaatgtaaaactgcaaaa
aagccacttgtggtggcaggatgtgtgcctcaaggaagtcgagacctgaaagagctagaa
ggtgtcagtgtagttggagttcagcaaattgatcgggttgtagaggtggttgaggagacc
cttaaaggtcacgaggtccgcctattgacccgcaaaactcttccagcactcgatcttccc
aaggtaaggaagaacaaatttgtggaaatccttccgataaatgttggttgtctgggggct
tgcacttattgcaagactaagcatgctcgaggtcatctaggaagctatacagttgacagc
cttgtcgggcgtgtcaaaagtgtggtggatgatggggtcaaagagatttggttgagcagt
gaagacaccggggcttatggtcgtgatatcggagtaaatcttccaatattactgaatgca
attgtcgcagcactcccatcaaatggaagcacaatgcttcgcattgggatgactaatcct
ccttatattcttgagcacttgaaggagatagctgttatattgcagcacccttgtgtgtat
tcatttctccatgtacctgttcaatcggggagtgatgctgtcttatctgcaatgaatcga
gaatatacagtaagcgaatttagaaaggtagtagatacattgactgaactggttcctggg
atgcagatagcaactgatatcatttgtggatttcctggtgaaacggatgaacattttgct
gagacggttaatctaatcaaggattacaagttttctcaagttcatatttctcagttctat
ccacgaccaggaactccggctgccaggatgaagaaggtggcaagtaatgtagtgaagaaa
cggagtcgtgagttgacttcagtttttgaatcatttatgccttataatggtatggaaggg
aatattgagaggatctggattactgatattgcaactgatgaaattcacctggttggacat
acaaagggctatgtgcaggttctggttgttggcccagaaagtttgcttgggtcttcagca
atcgtaaagattacttcagttggacggtggtctgtttttggggatgtcattgagattctt
gatcaaagtaatgatatcaaaagtcaaacagacaaaaaggacacaagtattcaagaaaga
tgctcaccttgctccagtcaagaagatacatgtgcatgtttatcaaaaaaaccagaaccc
tgtgcttgtgaatctcaggcatgtgaatccaacggatgcaatattactctgaatgattca
tatccagaatccccaaataaccaaaatgccggaggtaatccaagtttatcattgaggagg
aaaccttcaccggctgtgatggaaatggaacacaacgacattcagaaacttgccagcaat
gtgcatcatcgggaatggggtcttcttgacagagctcttctaggtggaatttttatgagc
ttgttgacgatattagctctacttttttatgtgcgctcttga
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