Erigeron canadensis (horseweed): 122608504
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Entry
122608504 CDS
T07610
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122608504
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122608504
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122608504
Protein phosphatases and associated proteins [BR:
ecad01009
]
HAD phosphatases
Fcp/Scp phosphatases
122608504
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122608504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
122608504
NCBI-ProteinID:
XP_043637543
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All DBs
Position
7:4018838..4022969
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AA seq
641 aa
AA seq
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MSKTSTSLPVLVKDVVHKIQLCLLDGIKSETQLSVAASLLSKSDYNDVVTERSIAQMCGY
PLCTNSLPCLSPPKKGRYRISLKEHKVYDLLETRMYCSTQCIVDSRTYAESLEDERSLDL
DRGKIDKVVKLFEGLSLKNEMGLGDKNDDFGMGKLSIKEKEDASIGIVSMEEWVGPSNAI
EGYVPQHDRKRPGSKLKDSKVKSEEQGIFDEMNFMSTIITQEDGYSISKVPSGDSKEKKN
SKGTNDKLIVHGGSLRKTQKKLETRSNDNKNKECEIVSNNKSKVHEFPSTDVSVMERAKS
SICDKEAEPSCSRLKSSLKSSEANKTNRSVTWADEKSDGTANQTHSGFSRTEKEKEKNMV
FDIVDEGVSEADHAFRFASAEACAEALSKAATAVASGELDVPDAFSEAGIVILPPPLDDN
EAISEGAVDPEPAPLKWPKKTGIVEADFLDSEDSWFDSPPEEFVLELSPFATMFMSLFAW
TSSSTLAYVYGRDDSFHEDYASVNGREYPQKVMLSDGRSSEIKRTLAGCLARALPGLVQD
LRLPTPVSTIEFGMGGLLETMSFFDPLPALRSKQWQVIVLLFVEALAVCRIPAVAPHLTN
KRSFFQKVFDDGQINRDEYEVLKDLILPLGRSPQLATQSGA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaacatcgacatcattaccggtacttgtgaaagacgtagttcacaagattcag
ttatgtctactagatggtataaaatccgaaacccagttatccgtagctgcttctttgctc
tccaagtccgattataatgatgttgtaaccgaacgatcgattgctcaaatgtgtggctac
ccgctttgcacaaactcattgccttgcttgtcgcctccaaagaagggcagataccgtatt
tctttgaaagagcacaaggtttatgaccttttggaaacgcgcatgtactgctccacccaa
tgcatagttgacagccggacgtatgctgaaagtttagaggatgaacggtctttggatctt
gatagagggaaaattgataaagtggtgaagctgtttgaaggtttgagtttgaagaacgaa
atgggtttgggggacaagaatgatgattttggaatgggtaaattgtcgattaaggagaag
gaagatgcaagtattggcattgtgtctatggaagaatgggttggcccttcaaatgcaatt
gaaggttatgttccacagcatgaccgcaaaaggccgggatctaaattgaaagattccaag
gtcaaaagtgaagaacagggcatctttgatgaaatgaatttcatgagtaccataataact
caagaagacggatatagcatatctaaagtaccttctggcgattcaaaagagaaaaagaat
agtaaggggactaatgataagttgatcgtgcatggtggttcattacgtaagacgcaaaaa
aagcttgagactagatcaaatgacaacaagaataaagagtgtgaaattgtctcaaataat
aagtcaaaggttcatgaatttccttccactgatgtgagtgttatggaaagggcgaaatca
tctatatgtgataaagaagctgaaccaagttgtagtcggctcaaatcttctctgaagtct
tcagaggcaaataaaacaaatcggtctgtcacttgggctgatgaaaaatctgatggcacg
gccaatcaaacacactctggattcagtaggactgaaaaggaaaaggaaaagaacatggtt
tttgacattgtggacgagggtgttagtgaggctgatcatgcattccgatttgcatcagca
gaggcatgtgctgaagctctgagcaaagcagcaactgctgttgcttctggggaattggat
gttccggatgctttttcggaagctggaattgtgatactgccacctcccctcgatgataat
gaagccatatctgagggtgcagttgatccagaaccagccccattgaaatggcctaagaaa
actggtatcgtagaagccgattttttggattctgaggattcttggtttgatagtccaccg
gaagagtttgttttagaactatcaccatttgcaacaatgttcatgtcgttgtttgcatgg
acttcctcatctacattggcatatgtatatggacgtgatgatagctttcatgaagattat
gcatctgttaatgggagggaatatccacagaaagtcatgttgtcagatggcagatcatct
gaaataaagcgaactcttgctggttgtcttgctcgtgctttgccagggcttgttcaggat
cttagacttccgactccagtttctaccattgaatttgggatgggtggcctattggagaca
atgtccttttttgacccacttcctgctctgagatcgaaacaatggcaggtgattgttctt
ttgtttgtagaggctcttgcagtgtgtcgaatccctgcagtagcaccacatttgacaaat
aaaagaagcttctttcagaaggtgtttgatgatggtcaaataaatagagatgaatatgaa
gttttgaaggatttgatacttccattaggacgatcccctcaattagccacacagagtgga
gcttag
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