Erigeron canadensis (horseweed): 122608595
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Entry
122608595 CDS
T07610
Name
(RefSeq) isoamylase 2, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00500
Starch and sucrose metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122608595
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
122608595
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-GeneID:
122608595
NCBI-ProteinID:
XP_043637626
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Position
7:35308798..35312668
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AA seq
842 aa
AA seq
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MAMLCLSCATHPPCLSCGTIKVSKLTVADICKYDRKMVPSFGRMDLDQNLVFGEVAKNVI
KGSNHNRRIQVLSASSPRVIQTVDKLATYLFRTQKGGHVKVIITRLNDGKYGANVEVSSL
QLSCKDADDVIMSWGIFRSDSSSLMPLQLNGSGIFETPFVKSSLDKLFVELEFDASLAPF
YVSFLLKTSLGGEEVEIKSHRQTKFCFPVGIKSGYPAPLGLSYSADGSINFSLFSRTAKS
VSLCLFNDSSNKKPTLEIDLDPYVNRSGDIWHVLMDSDSAINFVSYGYRCSNDGQERSRN
NSVLLDPYSKVIGENFLGEICREPAFDWSGDVRPNLPIEKLMVYRLNVMDFTSDGSSNLP
NEIGGTFSAVTDKLHHFKNLGVNAVLFEPIVPFDKKLGPYYPSHFFSPQNSFGPPGSSIS
KINSMKEMVKRLHASGIEIFLEVVFTHTCEDSSLSKIDKPSYYSDKNALNCAHPVAQQLI
LDSLRHWVIEYHIDGFCFINASSMIKGFNGENLSRPPLIEAIAFDPILSKTKLVADFFDP
ICRSAIEIQFPHWNKWAEMNTKFCSDTRNYLRGESLVSNLATRLCGSGDIFLNGRGPAFS
FNFVTKNHGFSLVDLVSFSSTNEFSWNCGEEGATKKKTVLETRLKQIRNFLFILYISLGV
PVLNMGDECGQSSGGKEHVKHSDRKPFSWKALQTGFAIQTTQFISFLSALKIRRSDLLQS
REFLKVENIDWHGPNLSPPAWEDPTNKYLAMSLKAEQVDQDEENPLPGDMFVAFNGGDAL
VTAMVPPPRLGMVWVRLVDTALPYPGFFSMAGELIVEKIPGSLTYEMAPHSYVLLEARAV
DG
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttatgtttatcttgtgcaactcaccctccttgcttaagttgtgggaccatc
aaagtgtccaagttaaccgttgccgatatttgcaaatatgatagaaaaatggtgccaagt
tttggaagaatggatttggatcaaaatttagtgtttggagaagttgcaaagaatgtgata
aaaggttctaaccacaatcgtagaatacaagttctgtctgcttcaagtcctcgtgttata
caaaccgtcgacaagttagctacttatttatttaggacacagaagggaggccatgtgaag
gttattattactaggttaaatgatggaaagtatggagcaaatgtcgaagtttcttctttg
caacttagttgtaaagatgctgatgatgtgattatgagttggggcatattcagatccgat
tcatcatcattgatgcccttgcaattgaacggttctggaatctttgaaaccccttttgtg
aaaagttctctagacaagctctttgttgaactggaatttgatgcaagtttagctcctttc
tatgtttcatttttgttaaaaacttcacttggtggcgaagaagtagaaatcaaaagccat
cgacagacaaaattctgcttcccagtgggtataaagtctgggtatcctgctccgcttggc
ctttcatattctgctgacggttccatcaacttttctcttttctcaagaactgccaaaagt
gtaagtttgtgcctgtttaatgacagctcgaacaaaaaacctactttagagattgattta
gatccttatgttaaccgatctggtgacatatggcatgtattaatggatagtgatagtgcc
attaactttgtgtcttatggctatcgatgtagtaatgatggtcaagaaaggtctcgtaat
aattccgttctattagatccgtattccaaagttataggggagaattttcttggggaaatc
tgccgggaacctgcttttgattggagtggtgatgtcaggccaaacttaccaatcgagaaa
ctaatggtttaccggttaaatgtgatggatttcactagtgatggatcaagcaacttacct
aacgaaattggagggactttttccgctgttactgacaagttacatcactttaagaatttg
ggtgttaatgcagtcttatttgagccgatagttccttttgataagaaattaggaccatat
tacccttctcatttcttttcaccacagaactcgtttggacctcctggcagctctatatct
aagattaattctatgaaagaaatggtaaagagattacacgccagtgggatcgagattttt
ctagaagttgtcttcacccatacttgtgaggattcatcactgagcaaaatagataaaccg
tcttattattctgacaagaatgccctgaactgtgcccaccctgttgctcaacaactgatc
ctagatagtcttcggcattgggtgattgagtaccatattgatgggttttgtttcatcaat
gcttcttctatgataaaggggtttaatggcgagaatctttctcgcccacctttaattgaa
gccatcgcttttgacccaatactctcaaaaaccaaacttgttgcagatttttttgaccca
atctgcagatctgcaatagaaatccagtttcctcattggaataaatgggcagaaatgaac
acaaaattttgtagtgatacaagaaattatctaaggggtgagagtctcgtcagtaatctt
gcaacccgactatgtgggagtggcgatatcttcttaaatggtcgtggtcccgccttttct
ttcaattttgtcactaaaaaccatggattctctcttgtagacttggtcagtttcagtagc
acgaacgagtttagttggaactgtggtgaagaaggtgccaccaaaaagaaaacagttctt
gagactagactcaaacagattcgtaattttcttttcattttatacatatctttgggtgtt
ccagtcctcaatatgggagatgaatgtggtcaatcatcaggagggaaggagcatgttaaa
cacagtgatagaaagccattcagttggaaagccttacaaactggttttgctattcaaaca
actcaattcatttcattcttgagtgcgttaaaaatcagaagaagcgatcttcttcaaagc
agggagtttttaaaagtcgagaatattgattggcatggaccgaacttatctccaccagct
tgggaagatccaacaaacaaatacttagccatgagtttgaaggctgagcaagttgaccaa
gatgaagaaaacccgttgccaggcgacatgtttgtggcctttaatggtggagatgctctg
gtaactgctatggtacccccacctcgtctgggtatggtttgggttcgtttggtggatacg
gctcttccatatcctggattcttttcaatggcgggcgagctcattgttgagaagatacct
ggatcacttacttatgaaatggcgcctcatagttatgttttgcttgaggccagggctgta
gatggttga
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