Erigeron canadensis (horseweed): 122608639
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Entry
122608639 CDS
T07610
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122608639
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
122608639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA
AAA_22
AAA_15
RsgA_GTPase
Fer4_6
AAA_29
AAA_23
Fer4_21
NACHT
Rad17
Fer4_2
TsaE
Fer4_10
nSTAND3
SRP54
Thymidylate_kin
AAA_28
Fer4_4
AAA_5
Fer4_16
AAA_24
Fer4_9
ORC-CDC6-like
Fer4_7
AAA_19
Fer4_3
Mg_chelatase
AAA_13
Motif
Other DBs
NCBI-GeneID:
122608639
NCBI-ProteinID:
XP_043637665
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All DBs
Position
7:1908106..1913812
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AA seq
605 aa
AA seq
DB search
MADRLTRIAILKEDRCKPKKCRQECKKSCPVVKTGKLCIEVTSASKMAYISEELCIGCGI
CVKKCPFDAIEIINLPKDLDKDTTHRYGANTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWSEILQYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLEQKDERDVKAELCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQMAEIYMF
DEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLEGFVPTENLRFRDESLTFKVAETPQESAEEAETYARYRYPTMSKTQG
GFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTVEDSEVEIPEFNVSYKPQ
KISPKFPHSVRHLFHQKIRDSYMHPQFVSDVMKPLQIDQLMDQEVVNLSGGELQRVALVL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGKPSIDCVANSPQSLLTGMNLFLSHLTITFRRDPTNFRPRINKLNSTKDREQKLAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcgattaactcgtatcgctattctcaaagaagatcgctgtaagcccaaaaaa
tgccgccaggagtgcaaaaaatcatgtcctgttgttaaaactgggaagctatgtatcgag
gttacttctgcatccaagatggcgtatatctctgaggagctttgcatagggtgtggtata
tgtgttaagaaatgcccttttgatgcaattgagatcattaatttaccaaaggatttggat
aaagatacaactcatcgttacggggccaataccttcaaattacacaggttacctgttcca
aggcccgggcaagttcttggattggttggaacaaatggaattgggaagtctacagccctc
aaagttttggctggaaaattgaaacccaatttggggcgttttaacaacccaccagactgg
agcgaaattttgcagtacttccgtggatctgagttgcagaactacttcactcgtattctt
gaagataatctaaaggccattataaaaccgcaatatgttgatcatattcctaaagcagtt
caagggaatgttggccaagtacttgaacaaaaggacgagagagacgtgaaggcagagctt
tgtgctgatcttgaactgaatcaggttatagatcgtaatgttggagatttatcaggtgga
gagcttcaaaggtttgcaattgctgttgttgccatacaaatggcagagatttatatgttc
gatgagccttcaagctatcttgatgtgaaacaaaggcttaaagctgcacaagttatcaga
tctttgcttagacctaacagttatgtgattgtggttgagcatgatttaagtgtgcttgat
tacttatcagacttcatttgctgcttatatgggaagcctggtgcatatggtgttgtgaca
ctacccttctctgtcagagaaggaatcaatatctttttagaagggtttgtgcctacagaa
aacctacgttttcgtgatgaatctcttacatttaaggttgctgagacacctcaagagagt
gctgaagaagctgaaacatatgcacgttatagataccctactatgtctaaaacgcaaggt
ggtttcaaactgaaggtggttgagggtgaattcactgactctcagatcatagttatgctt
ggtgagaatggaacaggaaagacaacttttattcgtatgctggctggtttactgaagcct
gatactgtggaagattctgaagttgagataccagagtttaatgtttcttacaagcctcaa
aagatcagtcccaaatttcctcactcagttaggcatttatttcatcaaaagattcgtgac
tcgtacatgcatcctcagtttgtttcggatgtcatgaagcctcttcaaatcgatcaatta
atggatcaagaagttgtgaatctttctggtggagaactgcaaagagttgcattggttctg
tgtcttggcaagcctgctgatatttacttgattgatgaaccaagtgcctaccttgactcg
gagcagcgtattgttgcttcaaaggttataaagagatttatactgcatgctaagaagact
gcatttgtggtggaacatgacttcatcatggcaacttatctagcagatcgggtgatcgtt
tatgaagggaaaccgtccatcgattgtgttgcaaattcgcctcagtcattattgactgga
atgaatcttttcttatcccatttgaccatcacgtttaggcgggacccaacaaattttcga
ccaagaatcaacaagctgaattcaacgaaggacagggaacagaaacttgctggatcttac
tattatttggatgactaa
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