Erigeron canadensis (horseweed): 122608686
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Entry
122608686 CDS
T07610
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00906
Carotenoid biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122608686
Enzymes [BR:
ecad01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
122608686
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
GDI
HI0933_like
FAD_oxidored
Pyr_redox_2
Thi4
FAD_binding_3
GMC_oxred_N
MCRA
AlaDh_PNT_C
Motif
Other DBs
NCBI-GeneID:
122608686
NCBI-ProteinID:
XP_043637711
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All DBs
Position
7:complement(31229793..31237104)
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AA seq
633 aa
AA seq
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MNTGVQNFQSFYGFKNTQMGNSGFYYEPRCKRQVISCFSPLKALNFTVLHEPQWSKQSLF
SFNPLKKQDNGKFEVGFLKKVERRQKLLSVSVKSVMDVSKVAEKDEVAVGKSKGVYDAIV
IGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYERDGYTFDVGSSVMFGFSDKGNL
NLITQALAAVGCKMEVIPDPTTVHFHLPNSFSVQVHREYNDFVSELTSKFPHEKEGILKF
YDVCWKIFNALNSLELKSLEEPLYLFGQFFKKPVECLTLAYYLPQNAGTIARNFIKDPEV
LSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLVDYGSE
ILYKANVTSIIIDNEKAVGVKLSDGREFFAKTVISNATRWDTFGKLLKKQDLPKEEENFQ
KVYVKAPSFLSIHMGVKAEVLPLDTDCHHFVLEDDWKNLEEPYGSVFLSIPTILDSSLAP
KGRHILHIFTTSSIEDWQGLSTKDYEAKKELIADKIICRLEQKLFPGLKSSIEFKEVGTP
KTHRRYLARDSGTYGPMPRSVPKGLLGMPFNTTAISGLYCVGDSCFPGQGVIAVAFSGVM
CAHRVAADVGLEKKAPVLDAGLLGVLGWLRSLA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgggtgttcaaaattttcaatctttttatggtttcaagaatacccagatgggc
aattcaggtttttattatgaacccagatgtaaaaggcaggtaatttcttgtttttcacct
ttaaaagccctaaattttactgttttacatgagccccaatggtcaaaacagagtcttttt
agtttcaatcccttgaaaaaacaagataatggtaaatttgaagtggggtttttgaaaaaa
gttgaaagaagacagaaattgttgtctgttagtgttaagtcagttatggatgttagtaaa
gtggcggagaaagatgaggtggcggtagggaagagtaagggtgtttatgatgcaattgtg
attggttccgggattggtggattggttgcggcgacacaattggcggttaaaggagctaag
gttttggtgcttgagaagtatgtgattcctggtgggagttctgggttttatgagagagat
ggttatacttttgatgttggttcgtctgtgatgttcgggttcagtgataagggaaatttg
aatttaataactcaagcattagcggcagttgggtgtaaaatggaggtgatacccgatcca
accactgtccattttcatctacctaatagcttctcagtccaagtacacagagaatataat
gatttcgtttctgaactcactagtaaattcccacatgaaaaggaaggaattctgaaattc
tacgatgtatgctggaagattttcaatgcgttgaattcactggaactcaagtctcttgag
gaacctttatacctcttcggtcagtttttcaagaagcccgtggaatgcttaacattagct
tactatttgccacaaaatgctggaaccattgctcgcaacttcataaaagatcctgaagtg
ctctcgttcatagatgctgagtgttttattgtgagcacagttaatgcattacagacacct
atgatcaatgcaagcatggtgttatgtgaccgacattttgggggcattaattaccctgtc
ggtggtgttggagggattgcaaaatccttggcaaaaggtttagttgattacggaagtgaa
atactttacaaggcaaatgtcacaagcattatcattgacaacgagaaagcagtcggagta
aagttgtctgatggaagagagttctttgccaaaaccgtaatctcaaatgctactagatgg
gatactttcggcaaacttttgaaaaaacaggatttaccgaaagaagaagaaaacttccaa
aaagtttatgtaaaagctccttcttttctttctattcacatgggggtcaaagccgaggtc
ttgccactggatacggattgccaccattttgttctcgaggatgattggaaaaacttggag
gagccgtatgggagtgtatttttaagtatccctactatacttgattcttcattggctcca
aaagggcgtcatattctgcacatatttacaacttcttccattgaggattggcaggggctt
tccacaaaagattacgaggcaaagaaggagcttattgcagacaaaattatctgcagactg
gaacagaaactatttcctggcctcaaatcctccattgaatttaaagaggtgggcacacca
aagacacacagacgatacctggctcgtgatagtggcacatacgggccaatgccacgtagc
gtgcccaagggcttgctgggaatgccttttaataccactgctataagcggtctctattgt
gtgggcgatagttgttttccaggacaaggtgttatagctgtagcgttctctggggtaatg
tgtgcacaccgggtagcagctgacgttggacttgaaaagaaggcaccagtattagatgct
ggtctccttggagttcttggttggttgagatcgttagcataa
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