Erigeron canadensis (horseweed): 122608802
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Entry
122608802 CDS
T07610
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122608802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122608802
04147 Exosome [BR:
ecad04147
]
122608802
04090 CD molecules [BR:
ecad04090
]
122608802
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122608802
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122608802
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122608802
CD molecules [BR:
ecad04090
]
Proteins
122608802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_29
ABC_ATPase
AAA_22
AAA_21
AAA_16
Zeta_toxin
MMR_HSR1
nSTAND1
AAA_15
AAA_18
G-alpha
NB-ARC
DUF815
AAA_25
DLIC
CPT
CPP1-like
Motif
Other DBs
NCBI-GeneID:
122608802
NCBI-ProteinID:
XP_043637818
LinkDB
All DBs
Position
7:4805792..4810210
Genome browser
AA seq
1068 aa
AA seq
DB search
MFIAAEITGMYLCWRLAIVALPVMFFLIVPGSIYGMRLSSNEEKIQEAYAVAGGIVEQSL
SSIKTVHSYVGEEKMVKRFSNALGPTLTLGVKQGQLKGMVFGSVGIIYAIWALLTWYGSV
LVIKQGIQGGDILSAGVCVIYGGFGLGSSFMNIKYFAEASISAVVISEMIERVPAIDSED
QQGTTISPVKGNLEFKDVDFAYPSRPDSLVLKRFNLKVKACQTVGLVGQSGSGKSTIINL
LERFYDPLEGEILLDNINIKSLQLNWLRKQMGLVSQEPILFATSIKENIMFGKEDATSEE
IVEASIKANAHDFITQLPNGYDTLVGELGTQMSGGQKQRISIARALLRDPKILLLDEATS
SLDSHSEKGVQEALTQASVGRTTIIIAHRLSTLRDADLIVVIQSGEVIESGSHEQLTLNT
GGAYSVMVQLQKTLVVDEKALSPTQGIKSKTLVDDVEITTENTGLVTTNSNLGESTNDAA
EEENSRPTWRHLIQMTRPEWKSALIGCIGALLNGLIQPTLAFAQGAMLSMFFLKDKDEMK
SQTRILCYGFIAIAASAFIVSVIQHYYFGIMGENLTKRVRELIFAKIMTFEIEWFHQENN
NTGAICSRLATDTVMVRNLVADRLAFFAQTISATISAVILSMILSWRLALVAISLQLVII
VSFYLKSLITTNPHNKCSEIASEAVHNHRTITAYHSHRTVMRLFEDTQNGPKKENNKQHW
YAGVALFARPFLTNINIAVLFWYGGKLLYQGSITYKHLFQTFYIVVSAGMIIAETGSMTG
DLSLGKNALKSLFIIIKRKSKMGIIKQEVISPEKMNGHIELKEVDFFYLSRPTKMVLKGL
SLKIDAGKVVALVGTSGSGKSTIIGLIQRFYDPCKGSVEVDGVDIGCYDLKALRSCIAWV
SQEPTLFAETIKENIAYGKENATEAEIIEAARLANIHEFISSMKDGYETYCGERGVQLSG
GQKQRIAIARAILKNPAILLLDEATSALDLRSEALVQDALEKTMVGRTCVIVAHRLSTIQ
TSDRISVIDNGRVIEEGSHNDLLAKGEEGAYFSLFSLQQQQQAFKSRD
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttatagcagctgaaataacgggtatgtacctctgttggagattggctatcgtggca
ctccctgtcatgttttttctgattgttccaggatccatttatggaatgcgtttatctagt
aatgaagagaaaatacaagaagcatatgcagttgctggggggatagtggaacagtcttta
tcatctataaaaacggttcactcttacgttggagaggaaaaaatggtaaaaagattttca
aatgcattagggccaacattgactcttggagttaaacaaggtcaactgaaaggtatggtg
tttggtagtgttggaatcatatacgctatctgggcacttttaacctggtatgggagtgta
ttggtcatcaagcaggggattcaaggtggagatattctcagtgctggagtgtgtgttatt
tatggaggatttggactcgggagttcttttatgaacatcaagtactttgctgaagcaagc
atttcagctgtagttattagtgaaatgattgagagagtcccagccatagattctgaagat
caacaaggcacaaccatatccccagtcaaaggtaacttggagttcaaagacgttgacttt
gcatacccatcaagaccagacagtttggttctgaagaggttcaacttgaaagtgaaggct
tgccaaacagttggattggttggtcaaagcgggtcaggcaagtcaacgattataaatctg
cttgaaagattctatgatccactggagggggagatattgttggataacatcaacataaag
tcactacagttgaattggttacgtaaacaaatgggcttggtgagtcaggagcctatactc
ttcgcaacctcaattaaagagaatattatgtttgggaaagaagatgctacaagtgaagag
attgtagaggcttccataaaagccaatgcacatgactttatcacacaactaccaaacggt
tacgatacgctggtgggagagttaggaactcaaatgtctggagggcagaaacaacgaatt
tccatcgcacgagcgctgcttagagacccaaaaatcttgctactcgatgaagccacaagt
tcgttggactctcattctgaaaagggggtgcaagaggctttgactcaagcttcagtagga
agaacaacaataatcattgcacatcgtttgtccacacttcgtgatgcagatttaattgtt
gtcattcaatcaggcgaagtgatcgagtcgggttcacatgagcaacttacactgaacact
ggtggagcatattcagtgatggtgcagctacaaaagaccttggttgtggatgagaaagcc
ttatcacccactcaaggaattaaaagtaaaacattggttgatgatgtagaaataacaaca
gagaatacaggcctggtaacaacaaattccaatctaggagaatcgacaaatgatgcagca
gaggaagaaaatagccgtcctacatggagacatctgatccagatgactcgaccagaatgg
aagtcggctctaataggctgcataggtgctctgcttaacgggttaattcaaccaacgcta
gcttttgctcagggtgcaatgttgtctatgttctttcttaaagacaaagatgaaatgaag
tctcagacaagaatattatgctatggttttattgccattgctgcatcggctttcatcgtg
agtgtgattcagcattactattttgggatcatgggagaaaatctaacaaaaagggtaaga
gagttgattttcgcaaagattatgacttttgagatcgaatggtttcaccaagaaaacaac
aatactggggctatatgttcaagacttgctactgacacagtcatggtgagaaaccttgta
gcagatcgactggcattctttgcgcaaacaatctcggctacaatttcagcagttatcttg
agtatgatattgtcttggagactagctcttgttgctatctccttacaactagtcatcatt
gtcagtttctaccttaaatcattaataactacaaacccacacaacaaatgcagtgaaata
gctagtgaagcagttcataaccatagaactattactgcatatcactcccaccggactgtc
atgagactattcgaagacacacagaatggcccaaaaaaagagaacaacaagcagcattgg
tatgcaggggttgctttatttgcccggccatttttaactaatattaatatcgccgtcttg
ttctggtacgggggaaagctactctaccaggggagtatcacatacaaacacctttttcaa
acattctacattgtggtatcagctgggatgataattgcagaaaccgggagtatgaccgga
gatttgtctttgggaaaaaacgctttgaaatcattattcataattataaagcgaaaaagc
aagatggggattatcaaacaagaagtgataagcccagaaaagatgaacgggcatatagag
ctgaaagaggtggatttcttttatctgagtagaccaacgaagatggtacttaaaggtcta
agcttgaagatcgatgctggaaaagttgttgcgctagtgggaacaagtgggtcaggaaag
tcaacaattattgggttgatccagaggttctatgacccgtgtaaagggtctgtggaagtt
gatggtgtagatatcgggtgctacgatctgaaagcattaaggtcttgtattgcatgggtt
agccaagaacctaccctatttgcagaaactataaaagaaaacattgcctatgggaaagag
aatgcaacagaagccgagatcattgaagcagcacgtcttgctaacatccatgaatttata
agttcaatgaaagatggatatgaaacttactgtggtgaaagaggggtgcaattatctggc
ggacagaagcaaagaatcgccatagctcgagcaatcttgaaaaatccagccattttactg
ctggatgaggcaacaagtgcattagacctcagatcagaagcgcttgtccaagatgctcta
gagaaaaccatggttggtaggacatgtgtaattgttgctcatcgattatctacaattcaa
acatcagatagaatatcagtgatcgataatggcagggtcatagaagagggttctcataat
gatctacttgccaaaggagaagagggtgcatacttttcacttttcagtcttcaacagcaa
cagcaagctttcaaaagtagagattag
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