Erigeron canadensis (horseweed): 122608946
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Entry
122608946 CDS
T07610
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
ecad04120
Ubiquitin mediated proteolysis
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122608946
04120 Ubiquitin mediated proteolysis
122608946
09126 Chromosome
03083 Polycomb repressive complex
122608946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122608946
04121 Ubiquitin system [BR:
ecad04121
]
122608946
03036 Chromosome and associated proteins [BR:
ecad03036
]
122608946
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
122608946
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
122608946
Cul7 complex
122608946
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122608946
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
122608946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1_POZ
Skp1
DUF5888
CBM_35_2
Motif
Other DBs
NCBI-GeneID:
122608946
NCBI-ProteinID:
XP_043637949
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All DBs
Position
7:10401026..10401504
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AA seq
145 aa
AA seq
DB search
MSKAIVVKSSDGETFEIDEAVASQSQIIKYMIEDGCADGVIPLPNVTAKVLFKVIEYCKK
HVDDNSETKKDNHHDAEAADLKTFDAEFMLSLKDVVKAAIYLEIQGLVDLCLDYTFNLDI
VKNQFPDMTPEEEAKFRRENAWAFE
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggccatcgtggtcaagagttcagacggggagacgttcgagattgatgaggcg
gtggctagtcagtcacagataatcaaatatatgattgaagacggatgtgctgatggtgtt
atccctcttccaaacgtcaccgctaaggtccttttcaaagttatcgaatactgtaagaaa
catgttgatgataattcagaaacaaagaaagataatcatcatgatgcagaggctgctgat
cttaaaacgtttgatgccgagtttatgctgtcattgaaagatgttgtaaaggctgcaatt
tatctggaaatccagggtctggtggatttatgcttggattatacattcaatctggacatt
gtcaagaatcagttcccagacatgactcccgaagaggaagccaagtttcgtagggagaat
gcatgggcttttgaatag
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