Erigeron canadensis (horseweed): 122608947
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Entry
122608947 CDS
T07610
Name
(RefSeq) SKP1-like protein 4
KO
K03094
S-phase kinase-associated protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
ecad04120
Ubiquitin mediated proteolysis
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122608947
04120 Ubiquitin mediated proteolysis
122608947
09126 Chromosome
03083 Polycomb repressive complex
122608947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122608947
04121 Ubiquitin system [BR:
ecad04121
]
122608947
03036 Chromosome and associated proteins [BR:
ecad03036
]
122608947
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
122608947
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
122608947
Cul7 complex
122608947
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122608947
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
122608947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1_POZ
Skp1
YeeD
ADNP_N
DUF5888
Motif
Other DBs
NCBI-GeneID:
122608947
NCBI-ProteinID:
XP_043637950
LinkDB
All DBs
Position
7:10403317..10405831
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AA seq
177 aa
AA seq
DB search
MAWFFAHHIIFFLRGNLTSLVHHKSTFIMSKAIVVKSSDGETFEIDEAVASQSQIIKYMI
EDGCADGVIPLPNVTAKVLLSKVIEYCKKHVDDNSETKKDNHHDAEAADLKTFDTEFMLS
LKDDVHVLHKAAIYLEIQGLMDLCLDYTFNLEIVKNQFRDMTPEEEAKIRRENPWAF
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggcatggttctttgctcaccacatcatcttttttctacgtggcaatctcacgtcatta
gtccatcataagtcgacattcatcatgtcgaaggccatcgtggtcaagagttcagacggg
gagacgttcgagattgatgaggcggtggcgagtcagtcacagataatcaaatatatgatt
gaagacggatgtgctgatggtgttatccctcttccaaacgtcaccgctaaggtcctcctt
tccaaagttatcgaatactgtaagaaacatgtcgatgataattcagaaacaaagaaagat
aatcatcatgatgcagaggctgctgatcttaaaacgtttgataccgagtttatgctgtca
ttaaaagatgatgttcatgtgttacataaggctgcaatttatctggaaatccagggtctg
atggatttatgcttggattatacatttaatctggagattgtcaagaatcagttccgcgac
atgactcccgaagaggaagccaagattcgtagggagaatccatgggctttttaa
DBGET
integrated database retrieval system