Erigeron canadensis (horseweed): 122609149
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Entry
122609149 CDS
T07610
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122609149
Membrane trafficking [BR:
ecad04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
122609149
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_2nd
Ig_TPPC8_C
Ig_TRAPPC9-Trs120_1st
SNAP
Ig_TRAPPC9-Trs120_4th
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
122609149
NCBI-ProteinID:
XP_043638144
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All DBs
Position
1:complement(55477121..55491025)
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AA seq
1272 aa
AA seq
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MADPAYFALRKMLLDEITPVVMVLPTPLVEQRCQKNGLSFVQMLTPFCYFNNIDVPVRTA
SDQPYRLQKFKLRMFYASDIRQPNVEVTKERLKQVITDAGNTEDPDLYLDPSPIETMSIS
SEPEFVPTWFQYFNKELVHSVSFSDHETFDHPVACLLVVSSNDEDPINKFVDLFNPNKLP
SLLNDGAMDPKIPKYFILVHDNQDGSSERATKILAEMRNTFGSNDCRLLCINSSQDGIAD
HEPNPWEHYSSNISPGQHLGCLLNNEDVDELKEFVRDLSSKDIIPNMEQRIRVLNQQVSA
TRKGFRNQIKNLWWRKGKEDTQETQSVGMYTFNSIESQIRVLGDYAFMLRDYELALSNYR
LLSTDYKLDKAWKRYAGVQEMMGLTYFMLNQSKKDAEYCMENAFSTYLRIGTPGKGNATR
CGLWWVEMLKTSGQYKDAAGVYFRISGEEPLHSAVMLEQASYCYLLSKPPMLRKYGFHLI
LSGDLYKKCDQIKHAIRAYRNALSVFKGTTWSHIHDHVHFQIGKWYAFLGRFDVAMKHML
EIVACSHQSKPMQELFMKDFFQILQKTGKTYKIPRLQLPVVDISSLNIVSEDHRTYGSLA
AVSVKESVWQTLEEEMVPSLSNVKTTWLDVQSKLLPNKLKQSNVCVAGEALKVEIAFKNP
LQLSIPISNVMLMCEHSENRTLPDANNSSSVDQGVEDVKTATVRELSSDTSLFTTSEVDI
VLAGGETTLAQLSVIPRKEGRLTITGVSWKLSDSMIGVYFFEPELIKKKMSKQKRKAMQN
TSKLEFLVIKSLPRLEGVINNLPATVYAGNLQRLSLELRNSSEIPVKNLKMKISHPRFLN
IGNPEVLDVKFPACLEKDKSSVHKDADLDTTKQSESVFHFPEDTAIHKGTPFFLPLWFRA
ATPGNVSLYLTVYYEIEDKSIAMRYRTLRTHHMLEVLPSLDVSFHISPCPTRLQEYIVRM
DVINRTSLRSLKLHQLSSVGNEWQISLIESIEDIFPSGNLVAGQALSCFLKLKNVKTTET
NREASRGDGTGVWLSHSSCESIYDTQCAPLVNFHHYEQLHQKTSRQEHHSTVDFMLISQM
DESENDSSDFPTTPQIFSHHACHCSVSTKRPIWWLLDGPRIIHHSFTDTFCETKLKMTIH
NSSSFIASVRISTLDSPPGSSPSANKVGWHDMSSPSMDIGVPAPDITGTNTGKPVSLESV
PPFIWSGSSTTRVKLDPNSTSEISLLVTTFAPGTYDLSNYTLNWNLLDCNDAREKEGTCH
GHPFYLTVLREE
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggcttactttgccctaagaaaaatgctactcgatgagatcacgccggta
gtcatggttctccctacgccattagtcgaacagcgatgtcagaaaaacggactttctttt
gttcaaatgctcactcctttttgctatttcaacaatattgacgtacctgttcgtacggcg
agtgatcaaccgtacaggctacagaagttcaagttacggatgttttacgcatcagatatt
cggcaaccaaatgttgaggtgacaaaggagcggttaaaacaggttattactgatgcagga
aacaccgaggatcctgacttgtacttagatccgtcacctattgaaactatgtcaatctct
tcagaacccgaatttgtaccgacatggtttcaatatttcaataaagagcttgtacacagt
gtttccttctccgatcatgaaacctttgatcatcctgttgcatgccttttggttgtctca
tcaaatgatgaggatcctatcaacaagtttgtggatcttttcaacccgaacaagttaccc
tcacttcttaatgatggtgcaatggatccaaagattccgaaatactttattttggttcat
gataaccaagatggttcctcagagagggcaaccaagattttggcagaaatgagaaatacg
tttgggtcaaacgattgtcgtttactttgtattaactcctcccaagatggaatagctgat
catgaaccaaatccatgggaacattatagttctaatatttcacctggtcagcatcttgga
tgtttgcttaacaacgaggatgtggatgagttgaaggaatttgttcgtgatttatcatcc
aaagatattattcccaacatggagcaaagaatccgtgttctaaatcagcaggtctctgca
acaagaaaaggttttagaaaccaaataaagaatttatggtggagaaaagggaaagaggat
acacaagagactcaaagtgttggcatgtacactttcaactcaattgaatctcagataagg
gtattgggtgattatgctttcatgttacgagattatgaactcgctctatcaaactatcgc
ctgctatccactgattacaagcttgacaaagcatggaaacgatatgctggcgtacaggaa
atgatgggattgacgtacttcatgctaaaccaatcaaaaaaagatgcagaatattgcatg
gaaaatgccttcagtacttacttacgtattgggacaccaggcaagggaaacgccacaagg
tgtgggctttggtgggttgaaatgttaaagacaagtgggcagtataaagatgctgctggt
gtttacttccgtatctctggtgaggaacctcttcattcagccgtgatgcttgagcaagca
tcttattgctaccttttatccaaaccacccatgttacggaagtatggatttcatctcatt
ctctctggtgatctgtacaagaaatgtgatcagataaaacacgcgattcgtgcatacaga
aatgctctttctgtatttaaaggaacaacatggagtcatattcatgatcatgtccatttc
caaattggaaagtggtatgcttttcttggaaggtttgacgtggccatgaaacatatgctg
gaaatcgtggcttgcagccatcaatcgaagccaatgcaagaattatttatgaaggatttt
ttccaaattctgcagaaaacaggcaaaacatataagataccacgacttcagttgccagtt
gtcgatatctcttcactcaatattgtttctgaagatcatcgaacttatggatcacttgct
gctgtcagtgttaaagaaagtgtttggcagactttggaagaggaaatggttccatcttta
tctaatgtcaagactacatggttggatgtacagtcaaagcttctaccaaataaacttaaa
caatcaaacgtctgtgtggcaggagaagctctgaaggtggaaattgcattcaaaaaccct
ctccaactctctattcccatttctaatgttatgctaatgtgtgagcattcagaaaatcgg
acactaccggatgcaaacaactcgtcttctgtagatcagggtgttgaagatgtgaaaaca
gcaactgtaagagagctcagctcagacacatcgctttttacaacatctgaggttgacata
gtgttggctggcggtgagacgactctggctcagttaagtgttattcctagaaaagaaggc
cggctaacaataactggtgtgagttggaaactgtctgattcaatgattggcgtttacttt
tttgagccagagttgataaagaaaaaaatgtctaaacaaaaaagaaaagctatgcaaaac
accagtaaactcgagtttttagttatcaagagcctacccagacttgagggtgttattaac
aacctaccggcaactgtttatgctggaaatttacaacgtctatcactggaactgaggaac
tcatcagagattcccgtgaagaatttaaagatgaagatcagtcatcccagatttctaaac
ataggaaatccggaagtattggatgtaaagtttcctgcctgcctggagaaggacaaatca
tctgtacataaagatgcagatcttgataccactaaacaatcagaaagtgtattccatttt
cccgaggatacagcaattcataagggaacccccttctttttgcctctttggttccgggca
gctactcctggaaacgtgtctttgtatcttacagtatattatgagattgaagacaaatcg
attgctatgcgatatcgcactttacgtacacatcatatgttggaggtgctaccatcattg
gatgtatcatttcacataagcccttgtcctacaaggttgcaagagtatatcgtgcgtatg
gatgtaataaacaggactagtttgaggagcttgaagcttcatcaattatcgtctgtcggg
aatgaatggcagatttctttaattgaatccattgaagacattttcccttcaggaaacttg
gttgctggtcaggctctttcatgttttctcaagctcaagaatgtgaagacaacagaaact
aatagagaggcaagcaggggggatgggactggtgtttggttgagtcatagcagctgtgaa
tcaatctatgatacacaatgtgcgcctcttgtgaatttccaccattatgaacaactgcat
cagaaaacttcacgtcaggaacatcatagcacagtcgactttatgttgatttcccagatg
gatgaaagtgaaaatgattcttctgacttccctaccaccccacaaatcttttctcaccac
gcctgtcattgcagtgtttcaaccaagagaccaatatggtggctacttgatggcccacgg
atcatccaccatagttttactgataccttctgtgagacaaaactcaaaatgacaattcac
aactcttcaagttttattgcttctgttcgtattagcacacttgattcccctcctggtagt
tcaccatcagcaaacaaagtcggttggcacgatatgtccagtccatctatggacatcgga
gttcctgcacctgacataaccggaaccaatacaggaaaacccgtctcactagagtccgtt
cctccttttatttggtcggggtcaagcaccaccagggtgaaacttgatcccaattccacc
tctgaaatatctctactggtcactacatttgctcctggtacttacgatctttccaactac
acattaaattggaatcttcttgactgtaatgatgcccgtgaaaaagaagggacgtgtcat
ggacatccgttttatctgaccgtattgcgggaggaatga
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