Erigeron canadensis (horseweed): 122609262
Help
Entry
122609262 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122609262
KO
K12821
pre-mRNA-processing factor 40
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122609262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122609262
Spliceosome [BR:
ecad03041
]
Complex A
U1 snRNP components
U1 related factors
122609262
Complex B
122609262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
FF
WW_TCERG1
WW_2
Motif
Other DBs
NCBI-GeneID:
122609262
NCBI-ProteinID:
XP_043638255
LinkDB
All DBs
Position
7:complement(30232896..30242010)
Genome browser
AA seq
539 aa
AA seq
DB search
MHPPHVRTEQQGISYGPPSEQFYPIGQPQMQSYPSMQSSYTMHPPHVRTEQQGISYGPPS
EQFYPIGQPQMQSYPSMQSSYTMHPPPVWTEQHWLSSGPLPQQYHLMGQPQMQSYPSMQS
SYTMHPPPVWTEQHWLSSGPLPQQYHLMGQPQMQSYPSMQSSYTVGCRVDRLLRVLSDLA
TLTPEYSPYTVCTRVLPTRLSAALGTISDFCHLDHVPSFSGASYTAQKEASTISSGNKVS
SSHVTVTPVTSVGDMLAEVKSERHWSPIPYVEVSAQDTEDLMQRKELETERSPLPRELLE
AFLLTKKQLKARAKAEFTKMLKEYEEDIMNRYTASAWVYNFSKDMGWRDAKKKFEGDKRY
QAVNEVDVRKGLYEDYMFDLQKKMIAKHAVDEKKFISTFNQASSASQDVAAEWQAHGCVD
DDRIFYYNKITGKSNWAKPLELMTPLERDNADAYPLWEVITTSKGENYFYNKVTGESKWT
LPDNVKLACEQAEKEASSLVAVTPVADVLAEVKLENSSLTGASKALVGVSEQDSEACLV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcacccacctcatgtccggactgaacaacaagggatatcttatgggccaccttctgag
caattttatccgattggtcaacctcagatgcagtcctatccatcaatgcaatcatcttat
actatgcacccacctcatgtccggactgaacaacaagggatatcttatgggccaccttct
gagcaattttatccgattggtcaacctcagatgcagtcctatccatcaatgcaatcatct
tatactatgcacccacctcctgtctggactgaacagcattggctatcttctgggccactt
cctcagcaatatcatctgatgggtcaacctcagatgcagtcctatccatcaatgcaatct
tcttatactatgcacccacctcctgtctggactgaacagcattggctatcttctgggcca
cttcctcagcaatatcatctgatgggtcaacctcagatgcagtcctatccatcaatgcaa
tcttcatatactgtagggtgtcgagtcgaccgattactccgagtactctccgacttggcc
actttgacccccgagtactcaccgtataccgtatgcacccgagtactcccaactcgctta
tcggccgccctgggaacgattagcgacttctgccaccttgatcacgtgcctagcttcagt
ggtgcttcatatactgctcaaaaagaagcttctactattagctccggaaataaagtttct
tcgagccatgtaacagttacacctgttacttctgttggcgatatgttggctgaggtcaaa
tctgagagacattggtctccaataccttacgtcgaagtctcagcgcaggacactgaggac
ttgatgcaaagaaaggaattggagactgagaggagccctttacccagagagttattggaa
gcattcctgttgactaaaaagcaattaaaagcaagagcaaaagcggaatttacaaagatg
ttgaaagagtatgaagaagacataatgaataggtatactgcaagtgcatgggtgtataac
ttttctaaagatatgggatggcgcgatgcaaagaaaaaattcgaaggcgataagcgctat
caagctgtaaatgaagttgatgtccgtaaaggtctttatgaggactacatgtttgatctc
caaaagaaaatgatagcaaaacatgcagtagatgaaaaaaaattcatatcaactttcaat
caggcatcaagtgctagtcaagacgtagcggctgagtggcaagcgcatggatgtgttgat
gacgacagaatattttattataacaagataaccgggaagagtaattgggctaaacctttg
gagttgatgacacctttggagagggataatgctgatgcttaccctctttgggaagtgatc
acaacttcaaagggtgaaaattatttttacaacaaggttacaggggaatctaaatggact
ttaccagataacgtgaagttggcttgtgagcaggctgaaaaagaagcttcaagccttgta
gcagttacacccgttgccgatgtgttggctgaagtcaaattggagaattcatctttaact
ggtgcttcaaaagctttagtcggagtctcagagcaggacagtgaggcatgcctagtctaa
DBGET
integrated database retrieval system
