Erigeron canadensis (horseweed): 122609415
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Entry
122609415 CDS
T07610
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122609415
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecad04040
]
122609415
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122609415
Ion channels [BR:
ecad04040
]
Other channels
Mechanosensitive channel (Piezo)
122609415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
122609415
NCBI-ProteinID:
XP_043638394
LinkDB
All DBs
Position
7:35411326..35428535
Genome browser
AA seq
2451 aa
AA seq
DB search
MRVSVSGFLLSLVLFTATLLNCSLISLGNLVASLLILFVHLERGFHSEGRTLLWAIAVFS
LVVILSQVTFLFVWAIWCGNCSAEVPLWAKLIGFMIVKTWRAPTVIYVLIMQVLVAFIAF
TELHGIRLSLFTWASSFLESLVEAIERIGSHVKVAFFLLLPAVQLVAGISNTSWVSLPFF
VSSCVGLVDWSLTSNFHGLFRWWRALWLYAGFNIFFLYVYQLPTRLPKFFSVIGDFIGLY
RISSASGWTQICSGVSLIIFFFGLSFVKLDLEEMNLIMSVREGNLTEHLLPSTNSFFIRE
TRSGERDTNLLLRGAVFRTFSINFFTYGAPVSLFALSFWSFYFASVCAFGLLGYVGYIIF
AFPSLFRLHRLNGLLLVFILLWAVSTYIFNIAFTYLNGTLGKDTEVWEMVGFWHYPFPGF
FILAQFFLGVLVALGNLVNNSVFLYISDEAHHTSTEDLTPEATDETKVLIVATVAWVLRK
LNRAIMLLQIFLIAMKPGFIHAVYMIFFFLYLLSHRINIQVQRALLLLCEIHFAILYTLQ
INLVSGALKKSETISSQILSQLGLLECDSSWDFVEIAMLACFCAIQKHGHKLLFSFSAIV
QHTPRPPVGFSILKAGLNKSVLLSVYANGNTTDSNDNPSQERKVASYLSAIGQKFLTLYR
SFGTYIAFITIIITVYMSRPNYMSFGYLFLLLFWITGRQLVEKTRKRLWFPLKVYSIVMF
ILIYILSIFPGFEEWVSTKVDLYTYLGFNSEASVFQNVSESLAITIAMQLYSYERRQNRY
CNLEDRNRSQFGVIGFIRRLLIWHSQKILFFTMFYASISPISLFGLVYLLGTVFCSILPK
ASRVPSKSFLVYTGLLATLEYLFQLCGGTFEMFPGQKHYNMSIFLGFKVYQSGVWGLEEG
LRAKVLVIAACTLQYNVFHWLEMMPSWLSGVGQWEEPCPLFFSQEDVLPIAVTPNGDTIA
SPVKKFGLKSSNSWPGNDQDLESETANSSNRRYMLGYFWGQVNENHKWKKRQVLSLRKER
FEMQKTSLKIYLKFWMENMFILFGLEINMIALLLASFALLNFVSLLYIASLAICVLLNRK
LVQRSWSLFVVLFASVLLLEYFAIWKTEKPFSGLGPSESSLHCHDCWRISEYHFNFCRSC
WLGLTVDDPRVLISYFLVFMLACLKLRADQFCSFSGSYTYRQMISQRKNAFVWRDLSLET
KTIWTLLDYLRLYCYCHLLDLVLALILITGTLEYDILHLGYLAFALSLFRLRLTILKKKN
KIFKWLRIYNFVVIVLSLAYQSPFIGAFNEGKCETIDYVFEVIGFRKYDYGFRITSRSAL
VEIIIFILVSLQSYMFSSPELNYVFQYLEAEQIGAIVHEQEKKAAWKTEQLQHIREDEEK
KRQRNMQVEKMKSEMLNLQIQLHTCSVHAHVHTHGSDCSPRNEGLRRRRAVSLNTDSALH
KDEDCFKKQESDINMDFPLHLPPFESPEISHLIGLADFEEGTDIEKREKSMMKENTLISA
VQLIGDGVSQVQSISNMAVSNIASYLNIPQEDLESDSDGPCSLTVATGKYSETECQHESH
MHMGSRRSSSLHSEKSRTSESASCGIIFQHIWNQMQSNNDVVCYCCFLLAFIWNFSLLSM
VYLAALFLYALCVNTGPSYIFWVLMLIYTEFYILIQYVYQIIIQHCGITIESVSLPEWGF
PTNRITSSFVVSLLPLFLVYLFTLIQSSITIKDSEWIFSTDFSSLTGNTAIPKEVLSDSS
WREYTQKMFQLASSISKLTIGNCIRYWKSLTQEAESPPYFIQVSLDVQSWPDYGIQPARV
ESGVNQLLRAVHNSRCKEIDPDGCLCASSVQVRSIEKSKDSPNVALAVFEVTYASPKEEC
VLAERYKSLTPAADVAKEIREAQEAGYTKELDFPYSIMSVIGGGKREIDLYAYIFGADLA
VFFLVAIFYQSVIKNKNEFLDVYQLEDQFPKEFVFILMAIFFLIVLDRVIYLCSFATGKV
IFYIFNLVMFTYSATEYAWSMEPSQHNAAGLALRAIYVTKAVSLALQAMQIRSGVPHKST
LYRQFLTSSISRVNYLGYRLYRALPFLYELRCVLDWSCTTTSLTMYDWLKLEDINASLYL
VKSDAVLNRADHRQGQKQRKVIKFCNGLCLFFILICVIWAPMLMYSSGNPTNIANPINDA
SVQFHIKTSGGRLLLYETTLCAITPWNVLNSSANLDPNNYLDSYNVDDIQMICCHADAIS
WWIVPDVVQRRFIPSLDMAVDMKFSWVLTRDRPKNKEVVKYEQTIQRSDLPRPSELEKVL
NGSSNSFRINNTYPRYFRVTGSGDVRHFDLKGDGVDAELLLNRGSSEWWSFYDISWLDSN
VCGDLMGPMAIVVSEETPQGLLGETLSKSSIWGLYITFVLAVGRFIRLQCSDLRMRIPFE
NLPSCDRLIAICEDIYAARAEGELVVEEVLYWTLVKIYRSPHMLLEYTNPD
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtatcagtcagcggatttctgctatctttggttctatttacagccactttactg
aattgcagcttgatttctctggggaacttggtagcttctctacttattctgtttgttcat
ctggaaagaggatttcattcagaagggagaacactactatgggctattgctgttttctca
ctagttgttatcctttcacaagtgacgtttctttttgtatgggccatttggtgtggaaac
tgcagtgcagaagtacctctgtgggcaaagctaataggattcatgatagtcaaaacatgg
agagcaccgacagtaatttatgttttgatcatgcaagtactggtggcattcattgcattt
actgaactccatggaatcagattaagtttgtttacgtgggcatcttcatttctggagagt
cttgtagaagccatagagcgaataggttcacatgtgaaagttgctttcttcttgttattg
cctgcggttcagctggttgcaggcatcagcaacacttcttgggtgtctttaccatttttt
gtttctagctgtgtcggtcttgtggattggtcattgacaagcaactttcatggtctcttc
aggtggtggagagctctttggctgtacgcaggcttcaatatattctttctatatgtctat
caactccctacaagattgccgaagttctttagcgttataggtgattttattggcctatac
agaatttcttcagcatctggttggacgcaaatttgttctggtgtttcactgatcatattt
ttcttcgggttatcttttgtcaaacttgacttggaggaaatgaatctcatcatgtccgtg
agagaaggcaacttgactgaacatcttctgccatcaacaaactcctttttcattcgtgaa
acaagatctggtgaaagggacaccaatctgttgttaagaggtgcagtttttcggacattc
agcatcaacttctttacctatggtgccccggtgtctttgtttgctctttcattttggagc
ttctattttgcgagcgtgtgcgcatttggattacttggatatgtaggctacataatattt
gctttcccatccttgttccgtttgcaccggctaaatggattgctccttgtcttcattctc
ttatgggctgtcagtacatatattttcaatatagcctttacatatctgaatgggacgctg
ggaaaggacacggaagtttgggaaatggtggggttctggcattatccttttcctggtttc
tttatccttgcacagttttttcttggtgttttggttgccctcggcaatcttgtgaacaac
tctgttttcctctacatctctgacgaggcccaccatacgtccactgaggaccttactccg
gaagctacagatgaaacaaaagtactaattgtagccacagtcgcttgggtactacgcaaa
ttaaatcgagctatcatgctgttgcagatatttcttattgcaatgaagcctggtttcatt
cacgctgtatatatgatattcttttttctctatttgttgagccaccgaatcaacatccaa
gtacaacgcgccttacttcttctgtgtgagattcatttcgcaatcttatacactcttcag
ataaatctggtctccggagccttgaagaaaagtgagacgataagttcgcaaattttgtca
cagttaggtctccttgaatgtgatagctcctgggattttgtggaaatagctatgcttgca
tgtttttgtgccattcagaagcatggtcacaaacttctattttcattttcagcaattgtg
caacacacgcctcgccctccagttgggtttagcattttgaaagctggtttgaacaaatca
gttctgttgtctgtctatgccaatggaaataccacagacagcaatgataacccctcccaa
gagagaaaagtggcgtcttatctcagtgcaataggacagaagtttctaacactgtatcgt
tcatttggaacttacatcgctttcataactataattatcaccgtctacatgagcagaccc
aattacatgtccttcgggtacctttttcttcttctattctggatcaccggtagacaactc
gttgaaaaaacaagaaagcgtctatggttcccactgaaagtgtattcaatagtgatgttt
attctcatctacattttaagcatatttccgggttttgaggaatgggtatccacaaaggtt
gatctttatacatacttagggttcaactcagaagcatcagtatttcaaaatgtttctgaa
tcattagcaataacgattgcaatgcaactttacagttatgaaaggagacaaaacaggtat
tgtaacttagaagatagaaatcggtcgcagtttggtgtgatcgggtttattagaagactt
ctaatatggcacagtcaaaagatcttgttttttactatgttttacgcttcaatatctcca
ataagtttatttggtctagtttatcttcttggtactgttttctgctctatcttaccaaaa
gcttcaagggtaccatccaaatcatttttggtttacacgggacttcttgctacattggaa
tatttattccagttatgtgggggtacatttgagatgtttccgggacaaaaacactataat
atgtcaatttttctaggttttaaggtatatcagtcaggagtgtggggcttagaagaaggg
ttgagggctaaagttttggtgattgctgcatgcacccttcagtataatgtatttcattgg
ctagaaatgatgcctagttggctttcgggtgttggtcaatgggaagaaccttgcccattg
tttttctctcaagaagatgtgttaccaattgcagtaactccaaatggggatactattgct
tcaccggttaagaaatttggattaaagagcagcaactcatggcccggaaatgaccaggat
ctagaaagcgaaacagccaacagtagcaacagaaggtacatgcttggatatttttgggga
caggttaatgagaaccataaatggaagaaaaggcaagttctttccttaaggaaggagaga
tttgaaatgcaaaagacttccttgaagatttatttgaagttttggatggagaatatgttt
atcctctttggtctcgagattaatatgattgcattgcttcttgcaagctttgctcttctt
aattttgtatcactgttgtatatagcatcacttgctatttgtgttctgctaaaccgaaaa
ctagtacaaagatcatggtcgttatttgttgttttgtttgctagtgttcttttactcgaa
tattttgccatttggaagactgaaaagccttttagtggacttggaccaagcgagtcttcc
ttgcattgccatgattgctggcggatttcggaatatcatttcaacttttgtcgaagctgc
tggctaggacttactgttgatgatcctcgagtgctgatcagctatttcctagtcttcatg
cttgcatgtcttaaactgcgagccgatcagttttgcagtttctcaggatcatatacatac
cgccaaatgatctctcaacgcaagaatgcctttgtttggcgagacctttctctcgaaact
aaaaccatttggactcttcttgactacttaaggctatactgctactgccatctactagat
cttgtgcttgcattaattttaatcactggaactctggaatacgatatattacaccttgga
tatctcgcttttgctttgagtcttttccgactaagacttacgatactaaagaagaaaaac
aagatctttaaatggttgcggatttacaactttgtagtcattgttctgtccctagcttat
caatcacccttcattggtgcttttaatgaagggaaatgtgaaaccatagactatgttttt
gaagttattggatttagaaaatatgattatggatttcggattacctcaagatctgcattg
gttgagattatcatcttcattcttgtatcattgcagtcatacatgttttcttcccccgag
ctcaattatgttttccaatatttggaagctgagcaaattggtgccattgttcatgaacaa
gagaaaaaggctgcatggaaaacagaacagttacaacatattcgtgaagatgaggagaaa
aagcgtcaacgcaatatgcaagttgagaagatgaaatctgaaatgcttaacttgcaaatc
cagcttcacacgtgttccgttcatgcccatgttcacacacatggttctgattgttcaccc
cgtaatgaaggcttacggagaaggagagccgtctccctgaatactgattctgctcttcac
aaagatgaagattgttttaagaaacaagagtcagatattaatatggactttccattacat
ttaccaccatttgagtcgccagaaatctcgcatcttattggacttgctgattttgaagag
ggtacagatatagaaaagagagagaaaagtatgatgaaagaaaatacactgatttctgct
gtgcagctgataggtgatggggtatctcaagtacaatcaatcagcaatatggcagtttcc
aacatagcaagttacttaaatatccctcaagaagaccttgaatctgattcagatgggcct
tgttcattaaccgtggcgactggtaaatatagcgagactgaatgccaacacgagagtcac
atgcacatgggttcgcgtcgttcatcttctttgcattctgaaaaaagtagaacgtctgaa
tcagcaagttgtgggataatctttcaacatatatggaatcagatgcaatcgaataatgat
gtcgtgtgctattgttgttttcttcttgcatttatttggaactttagcctgctgtccatg
gtgtatcttgcagctctcttcttgtatgctctttgtgtgaacaccgggcctagttatatt
ttctgggtcttaatgttgatttacaccgagttctatattttgattcagtacgtatatcaa
atcatcattcaacattgtggtatcactatcgaatcggtctctcttccagaatgggggttt
cctacaaacagaataacttcttcatttgtcgtcagtttgctgccgctttttctagtctat
ctctttactctcattcagagctctataactataaaagacagtgaatggattttttcaact
gatttcagctctcttactggaaatactgcaattcctaaagaggttctttcggattcaagt
tggagagaatatacacaaaagatgtttcagcttgcatcaagtatttctaaactgacaatt
ggaaattgtattagatactggaaatcattaacacaagaggcagaatctcccccatatttt
atccaagtatcgttagatgttcagtcatggccagactatgggattcaaccagcacgagtt
gaatctggagtaaaccaacttctaagagctgttcataattcaagatgcaaagaaatagat
cctgatggttgcctgtgtgcgagtagtgtccaagttcgtagcattgaaaaaagtaaagac
agtccaaatgtggcattggctgtttttgaagttacatatgcatctccaaaggaagaatgt
gtattagcggaaaggtacaagtctttgactcctgcggctgatgtggctaaagagataaga
gaagcccaagaggctggttatactaaagaactagattttccatattctattatgtcagta
atagggggaggcaaaagagagattgatctatatgcatatatatttggtgcggatttggca
gttttcttcttagtagccatcttctaccaatctgttatcaagaacaaaaatgaatttcta
gatgtttatcagctagaagatcaatttcccaaggagtttgtgtttatcttgatggctatc
ttctttttgattgtgcttgatcgcgttatatacctgtgttccttcgccactggaaaagtt
atattttacatctttaacctcgtaatgttcacatactctgcaaccgagtatgcctggagc
atggagccttcacagcacaatgcagctggtttagcccttcgtgcaatttatgttactaaa
gcggtttctctggctcttcaagctatgcaaatacggtcaggggttcctcataagagcact
ctctataggcaatttctgactagtagtatttctagagttaattatctgggttaccgtctc
taccgtgcactgccgttcctctatgaactcagatgtgttctcgattggtcctgcaccacc
acatctttgacaatgtatgactggctcaagttggaagacataaatgcaagtttgtacctt
gtcaaatctgatgcagttctaaacagggccgatcatagacaaggacagaagcagaggaaa
gttattaagttttgcaatggcttatgcttattctttatattaatatgcgtcatctgggct
cctatgcttatgtatagtagtggtaatccgacaaacatagcaaaccctatcaatgatgct
agtgtacagtttcacataaagactagtggtgggcgactattgttatatgagacaactcta
tgtgcaattacaccgtggaatgtgttaaattcttctgcaaatctcgatcctaataattat
cttgattcttataatgtggatgatatccaaatgatatgctgccatgctgatgctataagt
tggtggattgtccctgatgtcgttcaaagaagatttattccgtctcttgacatggctgta
gatatgaaattctcgtgggtactcactcgagataggcctaagaacaaagaggttgtaaaa
tatgaacaaactattcaacggtcggatcttccgagaccttcagaacttgagaaagttctt
aacggctcaagtaacagctttaggattaataacacttacccaaggtattttcgggttact
ggttctggtgatgtcaggcactttgacctgaagggggatggagtggatgcagagcttctt
ctaaatcgtgggagttcagaatggtggtcgttttacgatattagttggttagattcaaat
gtgtgtggagatttgatgggccccatggccatcgtcgtgtcagaggaaacaccacagggt
cttcttggtgaaacacttagcaaatccagtatttggggtctgtatataacctttgtgtta
gcagttggtcgcttcatcaggcttcagtgctctgacttgcgaatgagaatcccttttgaa
aaccttccttcttgtgacaggttaatcgccatttgtgaggatatatatgctgctagagca
gaaggcgaactcgtagtagaggaggttctgtactggacactggtaaaaatataccggtca
ccacacatgctgctagagtacaccaatcctgactag
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