Erigeron canadensis (horseweed): 122609479
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Entry
122609479 CDS
T07610
Name
(RefSeq) protein GLE1
KO
K18723
nucleoporin GLE1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122609479
03015 mRNA surveillance pathway
122609479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122609479
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122609479
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Mitofilin
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
122609479
NCBI-ProteinID:
XP_043638460
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Position
1:2438146..2449010
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AA seq
631 aa
AA seq
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MGGVRLELRCPQRVGNIVVDPQIDWSFDDLLSELNTIDSKLQASSLVASHLTKAHSSKIY
DFGYAEKTRKAFIMHVSDDESDDDDVETNSRHVVTGNRFAFEEIYLSDGVDSDREPTRGA
EWSLMDKGGVVEGALIELSHEHQLSVAEEIRTTISAFGTDLTNEKEKLTNALSRAEKIKE
ARRELDRKRDLQYQRQIAEELDNHLTDVQRHHEYKSQIEEKKIRDDAAIEEAKRKQLAVQ
EEKIRQEKLKAEEAKRQAEKKKDEEVKRAALEAERAAKEAADAVLAESEKKAADVAASQA
NVVKGAESALKLEERRLQMYNEVVGENFTSEMDSNNEYRKQASKMARFIKTITGTKENVR
VKADELRKLMNSTCPQSANSGIFAHKIVSLCTCANNDAVLYAYGHVIVMVTSQVPIALEI
LIAKLNKECIFTVPKYLAYSEKVFESRDAHLRAIGYQEDDGKLENTDTYLERLTSHVKLY
GALIQTEVNGIQNPHGIEEGWKWLARLLNALPANLYTIVALEAFIQVAGFALYKRYKNQF
KKLLNIISCDFLQALKDREDPKIKKVLMSLETYLQSNQFLVEPVGWRLQDTLLSHNFTVS
ESDHHQQYENPSRGYQQQYNYNSPNRYVYKR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgtacggttggaactacgatgtcctcaacgtgttggcaatattgtagttgat
ccacagattgactggagttttgatgacctcctatcggagcttaataccatagatagcaaa
cttcaagcatcctccttggtcgcttcacatttaaccaaggcacattcaagcaagatttat
gattttggttatgctgaaaaaacccggaaagcctttattatgcatgtatcggatgatgaa
agtgatgacgatgatgttgagactaatagcagacatgtggtcacgggtaatcgttttgct
ttcgaggaaatctatttgagtgatggtgtagattctgatagagagccaactagaggggcc
gaatggtctttgatggataaagggggagttgttgaaggtgcattaattgagctaagtcat
gaacaccaacttagtgttgcggaagagataagaaccacaatatctgcatttggaactgat
cttacaaatgaaaaagagaaacttaccaatgctctttcccgggctgaaaaaatcaaggag
gcacggcgcgagttggatagaaaacgtgatttgcaatatcaacgccaaattgcagaagaa
cttgataatcatttgacggatgttcaaaggcaccatgaatacaaatctcagattgaagaa
aaaaagataagagacgatgctgcaattgaagaggccaagagaaagcaactagctgttcag
gaagaaaaaatccgtcaagaaaaactgaaagctgaagaggcaaaacgtcaagctgaaaaa
aagaaagatgaagaagtaaaacgtgcagcgctggaagctgaaagagcagcaaaagaagca
gctgatgcggtgcttgcagaaagtgaaaaaaaggcggctgatgtggctgcttcccaagca
aacgtagtcaagggtgccgagagtgctttaaaactggaggaaagaaggttacaaatgtac
aatgaagtggtaggagaaaattttacatcggaaatggattctaataatgaatatcgtaag
caagcttccaaaatggctagatttatcaaaaccataacagggacaaaagagaacgtgaga
gtaaaagcagatgaactaaggaaactcatgaattcaacatgtccacaatcagccaatagc
ggaattttcgcacataaaattgtttctttatgcacatgtgcaaataatgatgctgtcctg
tatgcttatggacatgtaattgttatggttacttcccaggttcccattgccttggaaatt
cttattgccaaattaaacaaagaatgcatcttcacagttccaaagtatctagcttactca
gagaaagtgtttgaatcaagagatgctcacttgagagctattggttaccaagaagatgat
ggaaagcttgaaaatactgatacttatctagaaagattaacctcacatgtgaaactatat
ggggcactaattcagactgaagttaatggtattcaaaatccgcatggaattgaagagggt
tggaaatggcttgcacggttgttaaatgctctcccagcgaatttatacaccatagttgct
cttgaagctttcatacaggtggcagggtttgctttatacaaaagatacaaaaaccagttt
aagaagctattaaacatcatatcttgcgacttccttcaagcactcaaggatagagaagat
ccaaaaataaaaaaagttttgatgagtttggagacctaccttcaatctaaccagttttta
gtagaacctgtaggatggcggctgcaggatactttattatcacacaattttaccgtcagt
gaatccgatcatcatcagcagtatgagaacccatcccgagggtatcaacagcaatacaat
tataattcacccaatcgatacgtttacaagcgttga
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