Erigeron canadensis (horseweed): 122609715
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Entry
122609715 CDS
T07610
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122609715
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122609715
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122609715
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122609715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
122609715
NCBI-ProteinID:
XP_043638599
LinkDB
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Position
8:complement(15968742..15975295)
Genome browser
AA seq
951 aa
AA seq
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MEKSCSLLVHFDKGTPALANEIKEALEGNDDAAKIDAMKKAVMLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDKTDSKGKILPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSILSNLEHRHPYIRRNAILAVMAIYKLPQGEQLLIDAPEMIEKVLS
TEADQSAKRNAFLMLFACAQERAVNYLLTHVDRVGEWGELLQMVVLELIRKVCRTNTGEK
GKYMKIIISLLNVPSAAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKASHREIMVDMIMDVLRALSSPNHDIRRKTLDIVLDLITPRNINEVVLTLKKEV
VKTQSGELEKDGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAMDVAVFVR
EIIETNPKLRVSIITRLLDTFYQIRSARVCSCALWIISEYCLALSEVESGIATIKQCLGD
LPFYMASEEGDGIESSKKSQQVNSITVSSKRPAILADGTYATQSAASETAFSPPTVVQGT
LTSGNSGNLRSLLLTGDFFLGAVVACTMTKLVLRLVEVQSLKSEVNKASTQVLLIIVSML
QLGQSSFLPHPIDNDSYDRIVLCIRLLCNPSEEIKKIWLQSCRESFVQMLADKQLRETEE
LKAKAQVSHAQPDDLIDFYHLKSRRGMSQLELEDEVQDDLKRATGEFVKEGDAANKLNRI
LQLTGFSDPVYAEAYVTVNHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYT
LAPESSKQIKANIKVSSTETGVIFGNIVYETSNVFERTVIVLNDIHIDIMDYISPAVCSD
AAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALEGDCGFLAANLYA
KSVFGEDALVNLSIEKQGDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcatgctctttacttgttcactttgacaaaggaacacctgcacttgccaac
gagattaaggaggcgctcgaagggaatgatgatgctgcaaagattgatgccatgaaaaaa
gcggttatgcttttgttgaatggggaaacgttgccacaactttttatcaccattgttcgc
tatgttcttccatcagaggatcatactgttcaaaaactgctgcttctgtacctagaaatt
atcgacaaaacagattccaaagggaagatcttacctgaaatgatcttaatctgccaaaat
ttgcgaaacaatcttcagcatcccaatgagtacattcgtggggtgactttaaggtttctt
tgccgtcttaatgagacggagattattgagcccttgataccatctatactgtcaaatctg
gagcaccgacatccatacatcaggaggaatgcaatacttgctgtgatggccatctacaag
cttccacaaggagaacaacttctgattgatgctccagagatgatcgagaaggtcctctcg
acagaggcagaccaatctgccaaaagaaatgcatttctcatgcttttcgcatgtgcacag
gaacgtgcagttaattatcttttgacccatgttgatagggtgggagaatggggagaattg
ctgcagatggttgttttggagttgattcgcaaagtttgcagaacaaacacaggagagaaa
gggaaatacatgaagatcattatatccctattgaatgttccttctgctgcggttatttat
gaatgtgctggtaccctcgtgtcattgtcctcggctcccacggcaattagagctgcagcc
aatacttattgccagctcctcctctcccagagtgacaacaatgtgaagcttattgttctt
gatcgcttgaatgaactcaaggcttctcacagggaaatcatggttgatatgataatggat
gtgctcagggcactctcaagcccgaatcatgatattaggaggaaaacacttgatattgtt
cttgatttgatcactcctcgaaacatcaatgaagttgttcttacattgaaaaaggaagtg
gtaaaaactcaaagtggggaactagaaaaagatggggagtaccgccaaatgctcatccaa
gccattcattcttgtgctatcaagttccctgaagtggcaagcacagtcgtgcatctattg
atggatttcttgggtgatagtaatgttgcatcagccatggatgtagcagtttttgtgaga
gaaattattgaaacaaatccgaagttgagggtttcaatcataacaaggctattggacacc
ttttaccaaatacggtctgcacgagtttgctcttgtgctctctggatcattagtgagtat
tgccttgcactctcggaagttgagagtggaattgcaaccataaaacaatgccttggagac
ttgccattttatatggcttcagaagagggggatggtattgaatcttcaaagaagtctcag
caagtaaactcaataactgtttcatctaagaggccagctatcctcgctgatggcacttat
gcaactcaaagtgcagcttctgaaactgctttttcccctcctacggtggtccaggggaca
ttaacttcaggaaattcaggaaatttgagatctcttcttctaaccggtgatttcttcctt
ggggcagttgtagcttgcacaatgacaaaacttgttttgcgtttggtagaggttcagtca
ttgaaaagtgaagttaataaagcatcaactcaagtgttacttattattgtctcgatgtta
caacttgggcagtcttcatttcttccacacccgattgacaatgactcttatgatagaatt
gttctctgcataagactgctatgtaatcctagtgaagagattaagaaaatatggctgcag
tcttgccgtgaaagttttgtgcaaatgcttgctgataaacagctccgggaaacagaagaa
ctgaaggccaaggctcaggtctcacatgcacaacctgacgatctcattgacttctaccat
ctgaagagtaggaggggcatgagccagctggagttggaggacgaggttcaagatgatcta
aagcgtgctaccggagaatttgttaaagagggagatgctgccaataaactgaaccgtatt
cttcaactgactggatttagtgacccagtgtatgctgaagcatatgttactgttaatcac
tatgatattgtgcttgatgtaactgttatcaaccgaaccaaagaaacactccagaatctg
tgcttggaattggcaacaatgggtgaccttaaacttgtagagcgtcctcagaactacact
cttgctcctgaatcaagcaagcagattaaagcaaacattaaggtgtcctcgactgagact
ggagttatatttggaaacattgtttatgaaacttcaaatgtgttcgagcgtactgttatt
gtcctcaatgacatccatattgatattatggattacatatctccagctgtctgtagtgat
gcagcttttcgaaccatgtgggccgagtttgagtgggaaaacaaggttgctgtaaatact
gtaattcaagatgagaaggaattccttgatcacattatcaaatcaactaacatgaagtgc
ctcactgcaccgtctgctctcgaaggtgattgtggcttcttggctgccaacttatatgct
aagagtgtttttggagaggatgctttggtaaatttgagtattgagaagcaaggagatggt
aagctgagtgggtatattcgtataaggagcaaaactcaggggattgcattaagcttgggg
gataaaatcactcttaagcagaagggaggagcctga
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