KEGG   Erigeron canadensis (horseweed): 122609812
Entry
122609812         CDS       T07610                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122609812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122609812
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122609812
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     122609812
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122609812
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 TFIIF_beta PKD_2
Other DBs
NCBI-GeneID: 122609812
NCBI-ProteinID: XP_043638688
LinkDB
Position
8:complement(40036384..40040090)
AA seq 739 aa
MNISNSSGNNQKKRNFQIEAFKHKVVVDPKYADKTWKILQHAINEIYNHNASGLSFEELY
RNAYNMVLHKFGEKLYVGLVSTMTSHLMTMSNCIENANGGMFLEELNNRWDDHNKALQMI
RDILMYMDRTYVPSSHKIPVHELGLNLWRDKVIHLSGIQVRLQNTLLQLIHKERTGEVIN
RGLMRNIIKMLMDLGPSVYQQNFERPFLEVSGEFYRVESQEFIECCVCGDYLQKAERRLN
EEIDRVSHYLDARSEVKITNVVEKEMITNHITRLVHMDSGLVNMLVDDKYEDLNRIYSLF
HRVPNGLSTIREVMTSYLRETGKHLVSDPEKLKDPVEFVQCLLDKKDKYDKIIALAFSND
KTFQNALNSSFEFFINLNPRSPEFISLFVDDKLRKGLKGVSEEDVEDVLDKVMTLFRYLH
EKDVFEKYYKQHLAKRLLSGKDSSDDAERSLVLKLKTECGYQFTSKLEGMFTDMKTSKDT
IAGFYMKHGADLEAGPTLAVQVLTTGSWPTQPSTSCNLPAELTSLCDRFKSYYLGAHSGR
RLSWQTNMGTADVKANFGKGQKHELTVSTYQMCVLMLFNDTDHLTFKELEQATEIPSLDL
KRCLQSLACVKGKNVLKKEPMTKDIGEDDVFSVNEKFTSKFYKVKIGTVIAQKESEPEKH
ETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIIAEVIKQLQARFLANPAEIKKRIESLI
ERDFLERDGSDRKLYQYIA
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgaatattagtaatagtagtggtaataatcagaaaaaaaggaactttcaaatagaggca
tttaagcacaaagtagtggtggatccaaagtatgctgataaaacttggaagattttacaa
catgccattaatgaaatctataatcataatgccagtggccttagctttgaggagctttat
agaaatgcctacaatatggtgttgcacaaatttggggaaaagctatacgtaggacttgta
tccaccatgacttcgcacctgatgactatgtcaaattgtatagagaatgccaacggtgga
atgtttttggaagaacttaacaatagatgggatgatcataataaagcactgcagatgatc
cgtgacatattaatgtacatggacagaacatacgtgcccagtagccataagatacccgtt
cacgagcttggcctgaatctttggagggataaggtcatacatcttagcgggattcaggtc
cgtcttcaaaacactcttcttcaactcatacataaagaaagaacgggtgaagttataaac
cgagggctgatgagaaacataataaaaatgcttatggatttaggaccgtctgtttaccaa
cagaatttcgaaagaccttttctagaagtatctggagagttctatagggttgagtcgcag
gagtttattgagtgttgtgtatgtggggattatctacagaaagcagaaaggcgtttaaat
gaagaaatagatagagtgtcacattacttggatgctagaagtgaggtcaagataactaat
gttgtagagaaagagatgatcacaaatcacataacccgattggtccacatggattcagga
ttggtcaacatgcttgttgatgacaagtatgaagatttaaatagaatttatagtttgttt
catcgtgttcctaacggtctgtcaactatacgggaagttatgacctcttatctacgggaa
actggaaagcatctcgttagtgatccagaaaagttgaaagatccagtggagtttgtacaa
tgtctcttagataaaaaggacaagtatgataaaatcatcgctttagcattcagcaacgat
aaaacattccaaaatgctttgaattcatcatttgaattcttcattaatctgaacccccga
tctcccgaattcatctcattgtttgtggatgataaactgagaaaaggtctaaagggagtc
agtgaggaggatgtggaggatgttcttgataaggttatgacattgtttcggtatttgcat
gagaaagatgtgtttgagaagtactacaaacagcatttggcaaaaaggcttttatcggga
aaagatagttctgatgatgcagagaggagcctcgttctgaagctaaaaaccgagtgtggc
taccaattcacgtctaaactcgagggtatgtttactgacatgaaaacctccaaggacaca
attgcggggttctatatgaagcatggtgccgatttagaagccggtcctacattggctgtc
caagtcctgaccactggttcatggccaactcaacctagtacgtcatgcaatttaccggct
gagctcacgtctttatgtgacagattcaagtcatattacctaggggcccactcaggtcga
aggctatcttggcaaacaaacatgggaacagctgatgtgaaagcaaattttgggaagggt
caaaaacatgagctgaccgtttccacttaccagatgtgtgttttgatgctgttcaatgat
actgatcatctcacctttaaagaacttgagcaggctacagagatcccttcattagactta
aaaaggtgcctgcaatcgttggcttgtgttaagggtaagaatgtccttaagaaagaaccc
atgactaaagacattggagaagacgatgtgttttctgttaatgaaaagttcacaagcaag
ttttataaggtgaaaattggaaccgtgattgcacaaaaggaatctgaacctgagaaacac
gagacacgacagagggtggaggaggaccggaagccccaaattgaggctgcaattgtgcga
ataatgaaagccagaagggtgctggaccataataatattattgcagaggttataaagcag
ttgcaggctcggtttttggcgaaccctgctgagatcaagaaacggattgagtcacttatt
gaacgtgatttcttggaaagggatggttcagatagaaagttgtatcaatatattgcttaa

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