Erigeron canadensis (horseweed): 122609821
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Entry
122609821 CDS
T07610
Name
(RefSeq) zinc finger CCCH domain-containing protein 2-like
KO
K23047
E3 ubiquitin-protein ligase UNKL [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122609821
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122609821
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122609821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_AtC3H23
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Nab2-zf4
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
122609821
NCBI-ProteinID:
XP_043638699
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All DBs
Position
8:complement(42607362..42608564)
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AA seq
374 aa
AA seq
DB search
MASSCLEQQQHKSFHPSHHLYKKSTLRDIDIPPRKLLNRRASATSPEAYMADTMYQNESP
RVMPEETLFKKFLPYNTGVDSDDEEGDPYAADHFRIYEFKVRKCTRSRSHDWTDCPFAHP
GEKARRRCPRRYNYLGTVCADFRRGSCSRGDLCEFAHGVFECWLHPSRYRTEACKDGKNC
QRKICFFAHTQRQLRVVPPEPVKKYHSESSSHSRCCAHCRCHLDIHHTNSPTSTLNIDLD
SLSPPASPPFSPARSAVYSPISRFADRLARTESFGMTQMGQSAANNSSIISHKDCMNEMM
SNHAINELMRSMEAMSVVDDQNPRWMDSCYINGSSSTGGYGGDQQNVCTNNSNNEVSSSV
INGPDLGWVNDLLT
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagttgccttgaacaacaacaacacaagtcttttcatccttctcaccacctt
tacaagaaatctacactaagggacatagatatccctccccggaaacttctcaaccgccgt
gcctccgccacctcgccggaagcttatatggcggacaccatgtaccaaaatgagtctcct
agggtcatgcctgaagaaaccttgttcaagaaattccttccttacaatactggagttgat
tctgatgatgaagagggtgatccttatgctgctgatcatttccgtatttacgaatttaag
gttcgtaaatgtactcgcagccggtcccatgactggaccgactgtcccttcgcgcacccc
ggcgaaaaagctcgccgtaggtgtccgcgaaggtacaactatttgggaaccgtgtgtgcg
gattttcgtcgggggagttgtagccgtggagatttatgtgagtttgcacatggggttttt
gagtgttggcttcatccgtctcgttatcggactgaagcatgtaaagatgggaaaaactgt
cagcgaaaaatatgctttttcgctcacacgcaacgccagctgcgtgtggtcccaccggaa
ccggtgaaaaagtatcattcagaatcatcctctcattctcgttgttgcgcccattgtagg
tgtcatttagatattcatcatacaaattcacctacttcaactttgaacattgatcttgat
agcctttcaccgccggcatcaccgcctttctctccggctagatcagccgtgtattcgccg
atatctcgatttgctgataggttagctagaaccgaatcttttggtatgacccagatgggt
caaagtgcagccaataatagctctataattagtcacaaagattgcatgaatgagatgatg
agcaaccatgctataaatgaactcatgaggtcaatggaagcaatgagtgttgttgatgat
caaaaccctcggtggatggattcttgctacattaatggaagcagtagtactggtggatat
ggtggtgatcagcagaatgtgtgtactaataatagtaataatgaggtcagctctagtgtg
atcaatggtccagatcttggatgggtgaatgacctgctgacataa
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integrated database retrieval system
