Erigeron canadensis (horseweed): 122609926
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Entry
122609926 CDS
T07610
Name
(RefSeq) SUPPRESSOR OF ABI3-5 isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122609926
Spliceosome [BR:
ecad03041
]
Complex A
Other components
Complex A specific factors
122609926
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
122609926
NCBI-ProteinID:
XP_043638807
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All DBs
Position
8:complement(47301431..47308427)
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AA seq
1019 aa
AA seq
DB search
MDPGRYGLQHGWENNSALDRYGAVHEPNFREVDTYDDRRYLDERIPRDDIYSRNTFQRDE
LERENYPLPPPAVGGWPQARRRMYEDEYPLDRDSRRHFDPYPEMNTGREAGKYRENDYYD
GHEYERSHRYGGRDRDEYAYDDYDYKPRVSHSREDSREGDYDHGRHSYDSDNDRGGRREG
SWRRRDSRDRERDRKGLSRERDQSPYTRHERSRSRGNDDRVRSRSPRSRSHGRSYREDSY
DDDRYDRSDRRRDRDEKRHDHYSSAPSATVVVKGLSQMTTEEDLYQILAEWGPLRHVRVI
KERNSGASRGFAFIDFPSMGSARSMMEKVGDEGLVVDGRKLFFEYSSKPTGGHFGSDGPS
RSGPMNHKSTTLLSDWMCTICGCVNFARRTSCFQCNEARTDDAPPADMTSSNSASFGKKG
ETGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFLHFHSVADA
TKSLEATNGTTLEKNGQILRVAYAKSILGPGSGASSSQSSSLAAAAIEAAAFSQQYDAVG
WAPKEYNPDDKQPNDNQEQGGDPKDALAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYD
GNNGIWYTFDNQSQQYVACNDQNGIAPGKETEPSKASDASNTRKVVISAPAATITSNDKT
TSLPDAVQAAAAAAIAAEKKEKEKMKEIRLASKSSILASKKKMSNVLSMWKQRSHESQAP
RVALDDNQPSASAEEKSNPVVPLTKGKVVKDNIGPAISVNTSIQVVSLDSQDMPRPAGNI
SGGTLRGVIRGSGRGVVKSDTGYVGSSTNVPMGSSMVTEVRNSAVPFRTDASALGSYTPP
APSVSGKRRFSELPAQSASSIKEQPHTTYRDRAAERRSLYGSSSFGDGLSDLGAGDPNRD
LGLKRGGMDSMPFPPGVGGRGAGEGNSSSQSYEVITAEKAIDETNVGNRMLRNMGWQEGL
GLGKDGSGMVEPVQAQATEKRAGLGSQPKKLDPSLEVQAGDSYRTLIQKKALARFREMS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggtcgctatggtcttcagcatggatgggaaaataacagcgccctcgatcgg
tatggtgcagttcatgaaccaaattttcgggaggttgatacatacgatgataggagatat
ttagatgaacgaattccaagagatgacatctattctagaaacacattccaacgagatgaa
ttggagagggagaactatcctcttcctccgccggctgttggaggctggccccaagcaaga
agacgaatgtatgaggatgaatatccgcttgatagggattcaaggcgccactttgatcca
tatcctgaaatgaatacgggtcgtgaagctggaaaatatcgtgagaatgattactacgat
ggtcatgaatatgagagatcacatagatatggtggacgggatcgtgatgaatatgcatat
gatgattatgactataagcctcgtgtttctcatagtagggaggacagccgtgagggagat
tatgatcatgggaggcacagctatgattctgataatgacagaggtggcagacgggagggt
agttggcgaagacgtgattcccgtgatcgagaacgggacaggaaaggtctgagtcgagaa
cgagaccaaagtccatacacaaggcatgaacgttccaggtctcgtggtaatgatgaccgt
gttaggtctagatctccccgaagtcgtagtcatgggcgaagttaccgagaggacagttac
gatgatgatagatatgacaggtcagatagaagaagagatcgtgatgaaaaacgtcatgac
cattattcttcggctccatctgctactgttgttgtgaagggtctttcccaaatgacaacc
gaagaagatttgtatcaaatacttgctgaatggggaccacttcgccatgttcgtgtcatc
aaggagagaaattctggcgcttctcgtggatttgcatttatagatttcccttccatggga
tctgcacgttcaatgatggagaaggttggagatgagggccttgttgtggatggtaggaag
ctattctttgagtacagtagtaaaccaactggtggacactttgggtcagacgggccatca
aggtcaggacctatgaaccacaaaagtaccacacttctatctgattggatgtgtacaata
tgtggatgcgttaattttgcgcggaggacatcttgctttcagtgtaatgaagctaggaca
gacgatgctcctccagcagacatgacatcatcaaattctgcttcatttggtaagaaaggg
gagacaggtcccacccatgttttggttgtgagaggattggacgaaaatgctgacgaggaa
atgcttcggtacgagttttctaagcatgctccaattaaggatcttcgacttgtcagagac
aaatttactcatgtttcaaggggatttgcattcctacattttcattctgttgctgatgcc
actaaatctctcgaggcaacaaatgggacaactttggaaaaaaatggccaaattttgcga
gtggcatatgcaaaaagcattcttgggccaggatctggtgcatcctcttctcaatcaagc
agtcttgccgccgcggcgattgaggctgcagcattttctcagcagtatgatgctgttgga
tgggccccaaaagagtataatccagatgacaaacaacctaatgacaatcaagaacagggt
ggagatccaaaggatgctttagctccacagtctggttttgtgtgggatgaagcatctggc
tattactacgatgctgcttctgggttctattatgatggaaatacaggtctgtactatgat
ggtaataatggaatatggtatacttttgataaccaaagtcaacaatatgtcgcatgtaat
gatcaaaatggtatagcacctggaaaagagacggaaccttcaaaagcatctgatgcttcc
aatactagaaaagtggttatatctgcaccagctgctacaataacatcaaatgacaaaact
acttccttaccggatgctgttcaggctgctgctgcagcagccatagcagcagaaaaaaag
gagaaagaaaaaatgaaagaaataaggctcgcttcaaagagtagcatactggccagcaag
aagaaaatgagtaacgtattgtccatgtggaagcaaaggagtcacgagagtcaagcacca
cgagtagctcttgatgacaaccagccatctgcttccgcagaagaaaaatctaaccctgtt
gtaccattaacaaagggcaaagtagtaaaagacaacataggtccagcaatttctgtgaac
acttctattcaggtggttagcctagattcacaagatatgcccaggcctgcaggtaacata
tctggaggaactctaagaggcgtaattaggggatctggtagaggagtggtgaaatcagat
actggttatgtgggatcatcgacgaatgtgcctatgggatcatcaatggtcacagaagta
cgcaattctgcagtgcccttcaggacagatgcatctgctctaggttcttacacaccacca
gcaccttctgttagtggtaagagacggttttctgagttgcctgcgcagtcagcatcttcc
atcaaagagcagcctcatactacctatcgggatcgagctgcagaacggaggagtttatat
ggttcatcttcttttggggatggtctatctgatttaggggctggggatccaaatcgagat
ttgggattgaaaaggggtgggatggattctatgcctttccctcctggtgttggaggacgt
ggagccggagagggcaatagcagtagccaaagctatgaggtaattacagccgagaaggca
attgatgagactaatgttggcaatcggatgcttcgcaacatgggttggcaagaaggcttg
gggctaggaaaagatgggagtggcatggttgagcctgtgcaagcgcaagcaacagaaaag
agagcaggacttggaagtcagcccaaaaagttggatcctagtcttgaggtgcaagctggt
gatagctaccgaactttgattcaaaagaaagctcttgctagatttcgagaaatgtcatag
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