Erigeron canadensis (horseweed): 122609936
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Entry
122609936 CDS
T07610
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecad01003
]
122609936
Enzymes [BR:
ecad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
122609936
Glycosyltransferases [BR:
ecad01003
]
Polysaccharide
Structural polysaccharide
122609936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
122609936
NCBI-ProteinID:
XP_043638823
LinkDB
All DBs
Position
8:complement(31839476..31843739)
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AA seq
508 aa
AA seq
DB search
MGLKGFGEIRVEKVKKLNIRSTSKIKVWIIRSTTIVLFWTCLVQLSALRDSFFGYNLVLK
KDWPSSSSSSSSSVSDGDFSALDVNLLQSVVPTRVLPPKRVYKNNGYLLISCNGGLNQMR
AAICDMVAIARYLNVTLIVPELDKTSFWADPSEFEDIFDVDHFITSLRDEVRILKQLPIR
LRKKVELGIVHTMPPVSWSDISYYHNQILPLIQRFKVLHLNRTDARLANSGQPISLQKLR
CRVNFKALRFTSQIEELGRRVVNLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNDEEVEEL
TRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALALRALDIDRNIQIYIAAGEIYGGER
RMASLAAAYPKLVRKETLLGPDDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVV
EGHRRFLGFKKTILLDRRLLVELIDKYTSKSSSWDEFSSAVKAAHAERMGNPTKRLVIPD
RPKEEDYFYANPEECLQQPSEDEHVNIV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggggttaaaagggtttggtgaaataagagttgagaaagtaaaaaagttaaatataagg
tcaacaagtaagataaaagtatggataataaggagtacaactattgtgttattttggact
tgtttagttcaattaagtgcattaagagatagtttttttgggtataatctggttttgaaa
aaagattggccttcttcttcttcttcttcttcttcttcagttagtgatggtgattttagt
gctttagatgttaatttgttgcaaagtgttgttcctactagagttcttcccccgaaaagg
gtgtacaagaacaatggttacttactgatttcatgtaatggaggacttaatcaaatgcga
gctgctatatgtgatatggttgcaattgcaagatacttgaatgttacactaatagttcct
gagttggataaaacttcgttctgggctgatccaagtgagtttgaggacatttttgatgtt
gatcatttcattacctccttgagagatgaagtccggatacttaaacagctgcctatacgg
cttagaaaaaaagtggaattaggaattgtgcataccatgcctcctgttagttggtctgat
atttcatactaccacaaccagattcttcctttaattcaaagatttaaagttttgcatttg
aatagaaccgatgctcgacttgccaatagtggtcaacccattagccttcagaagctcagg
tgccgagtaaatttcaaagctctgagattcactagtcagattgaggagttgggtagacgg
gttgttaaccttttgagacaaaatggaccattcctagtgcttcacctgcgatatgaaatg
gatatgttagcattttctggttgtactcaaggatgcaatgatgaagaggtggaagaattg
acccgaatgaggtatgcttacccttggtggaaagaaaagatcattaactctgacttgaaa
aggaaagatggtctatgccctttgactcctgaagaaaccgctcttgcattaagggcatta
gacattgaccgtaacatccagatatatatcgctgctggtgaaatatatggtggcgaaagg
agaatggctagtcttgcagccgcctacccaaagctggtaagaaaagagactttattggga
ccagacgaccttcaattttttcagaaccactcgtcacaaatggcagcattagactatctt
gtatcgctcgaaagtgatatttttgtcccaacttatgatggaaacatggccaaagttgta
gaaggccatcgcagatttttgggtttcaagaaaacaatattattggatagaagactattg
gttgaactaatagacaaatatacaagtaaatcatcgagttgggatgagttctctagtgct
gtcaaggctgcacatgcagaacgcatgggtaaccccacaaaaagattggttataccagat
agaccaaaagaagaagactacttctatgcaaatccagaagaatgcttgcagcagccctcg
gaagacgaacatgtaaatatagtgtga
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