Erigeron canadensis (horseweed): 122610041
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Entry
122610041 CDS
T07610
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
ecad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122610041
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122610041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ecad03110
]
122610041
04131 Membrane trafficking [BR:
ecad04131
]
122610041
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ecad04091
]
122610041
Chaperones and folding catalysts [BR:
ecad03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
122610041
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
122610041
Autophagy
ER-phagy
Other ER-phagy associated proteins
122610041
Lectins [BR:
ecad04091
]
L-type lectins
122610041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF6827
DUF4834
Motif
Other DBs
NCBI-GeneID:
122610041
NCBI-ProteinID:
XP_043638954
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All DBs
Position
8:34736615..34740274
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AA seq
534 aa
AA seq
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MKMSSLNLCCFLLIGCLISQIYASSDAIFYESFDEPFEGSWIVSEKEEYSGVWKHSKSEG
HEDFGLLVSEKARKHAIVKELEKPVVLKDGTIVLQFEVRLQNGLECGGAYLKYLRPQEAG
WTAKGFDNDSPYSIMFGPDKCGATNKVHFIFKHKNPKSGEYVEHHLKFPPSVPSDKLTHV
YTAILKPDNEVIIMVDGEEKKKANFLSSDDFEPALIPPKTIPDPEDQKPEDWDERAQIPD
PEAKKPEDWDEDAPMEILDEEAEKPEGWLEDEPEEVDDPEAVKPEDWDDEEDGEWEAPKI
DNPKCESAPGCGEWRRPLKRNPAYKGKWSAPLIENPAYKGIWEPRQIPNPDYFELESPDF
EPIAAIGIEIWTMQDGILFDNILITNDEKTALTIRETTWKPKFKLEEDKQKAEEQSAGLD
GLKGIQKAVFDVLYKIANLPFLGDHQEKIMELIEKAEKQPNITIGVIVSIAVVIFSILLK
LLFGGKKAKKAVTVAPQKEDEGEASNTAAAAEGEEEEKKEEQNDPPRRRTRRDN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgagttcgttgaatttatgttgttttctgctgatcggctgtttgatttcacag
atttatgcttcttctgacgctatattttatgagtcgtttgatgaaccgttcgaggggagc
tggatcgtgtccgagaaggaggaatattccggtgtatggaaacactcaaagagcgaggga
catgaagattttgggcttcttgtgagcgagaaggctagaaagcacgcaattgtcaaggag
ctagaaaaacctgttgtgctcaaggatggcacaattgttctccaatttgaagttcgtctt
cagaatggtcttgagtgtggtggtgcatatttgaaatatcttcgaccacaagaggctggc
tggactgccaagggatttgataacgactcaccttactccattatgtttggccctgacaaa
tgtggtgctacaaacaaggttcactttatcttcaaacacaagaacccgaaaagtggagag
tatgttgagcaccatctcaaattccccccatctgtaccttcagataaattgactcatgtg
tacactgccattttaaagccagacaatgaggtcatcataatggttgatggtgaagagaaa
aagaaggctaatttcttatcctctgatgactttgaaccagcacttatccctccaaaaact
attcccgacccagaagatcaaaaacccgaagattgggatgagcgtgctcaaatccctgac
ccagaagccaaaaagcctgaggattgggatgaggatgcacctatggagatcttggatgag
gaagctgagaaacctgaaggctggctagaagatgagcctgaggaagttgatgaccctgag
gcagtgaagcctgaggattgggatgatgaagaggatggtgaatgggaagctcctaaaatc
gacaacccaaaatgcgagtctgcacctggctgtggagaatggaggagaccattgaaaagg
aacccagcttacaagggtaaatggagtgctcctcttattgaaaacccggcttacaagggt
atctgggagccacgccagatccctaaccctgattactttgaactcgagagccccgacttc
gagccaatcgcggctattggtattgagatctggacaatgcaagatggtatcttgtttgac
aacattttgataacaaatgacgagaaaacagcattgaccatcagggagactacatggaag
ccaaagtttaagttggaagaagataaacaaaaggcagaagaacagtcagctggtttagat
ggtctcaagggaatccagaaagctgtgtttgatgtcctttacaagattgcgaatctacct
ttcttgggcgaccaccaggaaaagatcatggaacttattgagaaggcggaaaagcaacca
aacatcacaattggcgtcatagtttctattgctgttgtgatctttagcattttgttgaag
ttgctgtttggtgggaagaaagcgaagaaggcggtgactgtggctccacaaaaggaggac
gaaggtgaggcctccaacaccgcggcagcagcagaaggtgaagaggaagaaaagaaagaa
gagcagaatgaccccccacgtagaaggacaagacgtgacaactga
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