Erigeron canadensis (horseweed): 122610072
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Entry
122610072 CDS
T07610
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
ecad04120
Ubiquitin mediated proteolysis
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122610072
04120 Ubiquitin mediated proteolysis
122610072
09126 Chromosome
03083 Polycomb repressive complex
122610072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122610072
04121 Ubiquitin system [BR:
ecad04121
]
122610072
03036 Chromosome and associated proteins [BR:
ecad03036
]
122610072
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
122610072
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
122610072
Cul7 complex
122610072
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122610072
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
122610072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
EFL1
Motif
Other DBs
NCBI-GeneID:
122610072
NCBI-ProteinID:
XP_043638989
LinkDB
All DBs
Position
8:41148430..41149718
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AA seq
156 aa
AA seq
DB search
MAAEKKSIVLKSSDGETFEVDEAVAELSQTIKHMIDDQCADTAIPLPNVTSKILSKVIEY
CKKHVEHKADEDKPADDDLKTFDADFVKVEQGTLFDLILAANYLNIKELLDLTCQTVADM
IKGKTPDEIRKTFNIKNDYTPEEEEEVRRENAWAFE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagaaaagaagtcgatagttttgaagagctccgatggcgagacttttgaggtc
gatgaggccgtcgctgagttgtcgcaaaccataaagcatatgatcgacgatcaatgcgcc
gataccgccatccctttgcctaatgtgaccagtaagatcttgtccaaagtgattgagtat
tgtaaaaagcacgttgaacacaaagctgacgaggacaagcctgctgatgacgatctgaaa
acttttgatgctgatttcgttaaagtcgaacagggcactctctttgatcttatcttggct
gccaactatctgaacatcaaggagttattggacctgacctgccaaactgtagccgatatg
atcaaaggtaagactccagatgagattcggaagacattcaacatcaagaatgattacacc
cctgaagaggaggaggaggttcgccgtgagaatgcctgggcttttgaatga
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