Erigeron canadensis (horseweed): 122610102
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Entry
122610102 CDS
T07610
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122610102
Membrane trafficking [BR:
ecad04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
122610102
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Syntaxin_2
Helo_like_N
Cauli_AT
Laminin_II
ING
Zw10_N
BLOC1_2
Occludin_ELL
Vps53_N
Sigma70_ner
Prominin
DUF1664
DUF2408
TMPIT
Motif
Other DBs
NCBI-GeneID:
122610102
NCBI-ProteinID:
XP_043639030
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All DBs
Position
8:complement(47475804..47479095)
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AA seq
264 aa
AA seq
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MASSISAISEELGEIDGQISDIFRALSNGFQKFEKIKDANRQSRQLEELTGKMRECKRLI
KEFDREVKELEYTVDPDTSKILNEKKQSMVKELNSYVALKKQYASNIENKRVDLFGGPAE
GFEDDNNGGFLASSMTNQQLMDNGHQMMDETDQAIERSKKVVHETVNVGTETAAALKAQT
EQMSRIVNELDSIHFSLKKASQLVKEIGRQVATDRCIMTLLFLIVAGVIAIIIVKLVHPN
NKDIRDIPGLAPPVPSRRLLWIPD
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcgatttcggccataagcgaggagcttggcgagattgacggacagatttct
gatatttttcgtgcactttcaaatggatttcaaaaatttgagaagataaaagatgcaaac
agacaaagtaggcagttggaagaacttactggaaagatgcgtgaatgtaaaaggcttatc
aaagaatttgacagagaagtcaaagagttggaatatacagttgatcccgatacaagcaag
atactgaatgagaaaaagcagtcaatggtcaaggagctgaattcctacgttgcactgaaa
aagcaatatgcaagcaacattgaaaacaaacgagttgatctatttggaggaccagctgaa
ggatttgaggatgataataatgggggctttctagcttcatctatgacaaatcagcagtta
atggataatggtcatcaaatgatggatgagactgaccaagctattgagagatcgaaaaag
gtcgtccacgagactgtaaatgttggaaccgagactgcagcagcacttaaagcacaaaca
gaacaaatgagtagaattgttaatgaacttgactcgatccatttttcactcaagaaggca
tctcaattggtgaaggaaattggtaggcaggttgcaactgatcgatgcattatgacctta
ctctttcttattgtggccggtgtcatagccatcattatcgtgaagctggtgcatccaaac
aacaaagacattcgagatattccgggattagcccctcccgttcctagtcgaagacttcta
tggatccctgattaa
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integrated database retrieval system
