KEGG   Erigeron canadensis (horseweed): 122610116
Entry
122610116         CDS       T07610                                 
Name
(RefSeq) coilin
  KO
K13150  coilin
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122610116
Spliceosome [BR:ecad03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122610116
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N DUF4055
Other DBs
NCBI-GeneID: 122610116
NCBI-ProteinID: XP_043639047
LinkDB
Position
1:complement(2595427..2601802)
AA seq 640 aa
MPSLRIRVAFEDPSVLTQTQRSQGMSNSWILIEPIQQLPKISDVCNHIFHMFSLHTSCPN
GILLFMEGFVLPPSESARILKDNDIICVKRKGVALGEVIEGAVTCNLLELNGMEPVENGV
LLLANEEFDKETGGYQSDSEDAEEEKLEVEPSPKDKASKKRKVSPKLHSSKKKRKRSLMT
DGVEDEVATEDGNSNKDECLPTKNIRKKSKPNQEKKSAGSETITVKGTSKVKRKKKQGLG
VVNDAEDEVMIDEFVKVNNREEVRQESAAPDVAKKVPSRSARRKKVKRQWRRELAKNSQN
PDTHLEPEIVKAENKEANGHPDELLKQDQVPAKLVDKNIIKQEESNGNGNMDTELVPRVV
RPGHIRFEHLDQDEDAREIEVPNVPFQWNGITSKKKGQKWGIEKFSTSQQDESQIATKGP
STKLPEDTSVPLVGFSDFDHLPLCSSPKEDDVIAYRLLELSSSWTPELSSFRVGKISHYN
GNVIVLKPVPEYPIVVDKTDEDEDGPDNSLYKEDGSLETKFEALVDVRSFKRSNSDARIA
VANGVNPNPQGDDKDVASKLLSISNNNKTHLPKDPNQEVMNKEGNTWDELKQALIAKKAE
LQGMNAEMKKDSGRNKWSYRALRGSALGPTMAMLRSSNNI
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgccgtcgctaagaattcgtgtggctttcgaagacccctccgtcctgacccaaacacaa
cgatcacaaggaatgagcaacagctggattctaatcgaaccaattcaacagcttccgaaa
atctcggacgtctgtaatcatattttccacatgtttagtcttcacacttcttgccctaac
ggcattctcctcttcatggaaggctttgtgttaccaccatccgagtcagcacgaatcttg
aaggacaacgatataatatgtgtgaagaggaaaggggtggcgttgggtgaagttattgag
ggggcggttacatgcaatttgctagagcttaatgggatggaacctgttgaaaatggcgtg
ctacttttagcaaatgaagaatttgataaggaaactggtggttatcaaagtgactccgag
gatgctgaagaggaaaagttggaagtagaaccttcacctaaagataaagcttccaagaag
aggaaagtctctccaaaacttcacagctcaaaaaagaagaggaaaagatcactgatgacg
gatggtgttgaagatgaagttgcaacagaggatggcaactctaacaaggatgaatgtctt
ccgacaaaaaacattcgcaaaaaaagtaaaccaaaccaggagaagaagagtgctggaagt
gaaacaatcacagtaaagggtacttctaaggtgaagaggaaaaagaaacaaggtttaggg
gtggtgaatgacgctgaagatgaagttatgatagatgaatttgtcaaggttaataatcgc
gaagaagtaagacaagagtctgctgcacctgatgtcgctaaaaaggtccctagtagaagt
gctagaaggaaaaaggttaagagacaatggagacgggaacttgctaaaaattcacagaat
cccgatacacatttggaaccagaaatagtcaaagctgaaaacaaagaagctaatggccat
ccagatgaacttttaaagcaagatcaggtgcctgcaaaacttgtggacaagaatataatt
aaacaagaagaaagtaacggtaatggtaacatggatactgaacttgttcctcgtgtagtc
agaccaggacatattcgctttgaacatctggatcaagatgaagatgcaagggagatcgaa
gtaccaaatgtaccgtttcagtggaatggtatcacgagcaagaaaaagggtcaaaaatgg
ggtatagaaaagttttcaacttctcaacaagatgaatcacaaatagcaaccaaaggacct
tcaacaaagttgcccgaagatacatcagtacctttggttggcttcagtgactttgatcat
ctccctctctgcagttcaccaaaggaagatgatgtcattgcataccgtcttcttgagcta
tcttcttcttggacccctgagctctcttccttccgggttggaaaaatatcacattacaat
ggcaatgtcattgttctgaagccggtgccagagtatcccattgttgttgacaagaccgat
gaagatgaagatgggccagacaactctctttataaagaagatggaagtttagagaccaag
tttgaggctcttgttgacgtgcgtagcttcaagcgaagtaactcagatgcgaggatagca
gtcgctaatggagttaacccgaatccccagggtgatgataaggatgttgcatcaaagtta
ttatctataagcaacaacaataaaacacatctccccaaagatcctaatcaagaggtcatg
aacaaagagggtaatacgtgggatgaactcaaacaggctttaatcgcaaagaaagcagag
ttgcagggaatgaatgcagagatgaagaaagattccggtaggaacaaatggtcatataga
gccttgagaggtagtgcacttggtccaacaatggcaatgttaagatctagtaacaacatt
tga

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