Erigeron canadensis (horseweed): 122610212
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Entry
122610212 CDS
T07610
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122610212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122610212
Spliceosome [BR:
ecad03041
]
Complex C
Other components
Step II factors
122610212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
Motif
Other DBs
NCBI-GeneID:
122610212
NCBI-ProteinID:
XP_043639141
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All DBs
Position
1:complement(55023294..55028465)
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AA seq
434 aa
AA seq
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MTHNTKACMERPRKLGAKYTSKNIAPDEKIETFELNYDGKRDRCNGYDPALYAYVIDRYE
ARDEAWKKHLKDQQLKKLEKNNTGNAEEGVSDDEDNEDALKVDEAKVDESKQMDFTKVEK
RVRTTGGGSTGTVRNLRIREDTAKYLLNLDENSAHFDPKTRSMRGDPLPDMNPNEKFYSG
DNQNRFSGQALEFKQLNIHVWEAFEKGNDVHMQAAPSQAELLYQNFKVNIEKLKSQVKET
IVEKYGNAAAEEPLPRELLLGQSESEVEYDRAGRIIKGQEMALPKSKCEEDVYINNHTAA
WGSWWKDSQCGYKCCKQFVRNSYCTGAAGIEAAEAATDLMKANIARKEATEDVMAPTEEK
QPGTWGTDIPDDLVLDQHKLAESLKKEDKRKREEKDERKHKYNVKWTDDVTAEDMETYRM
KKVHHDDPMKDFLN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacccacaacaccaaggcatgcatggagaggccgcggaagcttggagcaaaatatacc
agtaaaaacatagcacctgatgagaaaattgagacttttgagctcaattatgatgggaaa
cgggacaggtgtaatggttatgatccagctttgtatgcttatgtcattgatagatatgaa
gctcgtgatgaagcttggaagaagcacttgaaggatcagcagttaaaaaagctagagaag
aacaatactggaaatgcggaagaaggggtcagtgatgacgaggacaatgaagatgctttg
aaagtagatgaagccaaagtcgatgaaagcaagcagatggattttactaaagttgagaag
cgtgttcgtacaaccggaggtgggtctacaggaactgtgagaaatctgcgtattcgagag
gatacagcaaaataccttctgaatcttgatgaaaactctgcacattttgatccgaaaact
cgatccatgcgtggggacccccttccagatatgaatccgaatgagaagttttattctggg
gataatcagaacagatttagtgggcaagctttggaatttaagcaattaaatatacatgtc
tgggaagcatttgagaaagggaatgatgtgcacatgcaagcggctccttcacaagctgaa
ttactgtaccaaaattttaaggttaatatagagaagttgaaatctcaagtgaaggaaacg
attgttgagaagtatgggaatgcagctgccgaggaaccgcttccgagagagctcttactg
gggcaaagtgagagcgaagttgagtatgatcgggctggtaggatcattaagggccaggag
atggcccttcccaagagcaaatgcgaagaggatgtttatattaataaccacacagctgct
tggggctcgtggtggaaggacagtcagtgtggttacaagtgctgcaagcagtttgttagg
aacagttattgtactggtgctgctggcatagaagctgcggaagccgcaacagacctcatg
aaggctaatattgctcgcaaagaggccacagaggatgtgatggctccaaccgaagagaag
cagcctgggacttggggaactgacattccggatgacttggttttggaccaacataaactg
gctgaatcacttaagaaggaggacaagcggaagagagaagagaaagatgaaaggaagcac
aaatacaatgtcaagtggactgatgatgtcacggctgaagacatggagacatatagaatg
aagaaggttcatcatgatgatccaatgaaagacttcttaaactag
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