Erigeron canadensis (horseweed): 122610673
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Entry
122610673 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122610673
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122610673
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122610673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
122610673
NCBI-ProteinID:
XP_043639577
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Position
8:33373570..33376589
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AA seq
415 aa
AA seq
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MVLLSWEQYHKCRLPLHLWIVVDYAVVFVFRLLMLVDNAIAASVGLDDGRQLRGSRYYGR
LLVLCILYAVLYPFLWIWSVVGGVWFAGAMKCLPERHQKWGYTVWLLFSFCGLICLAGIF
WKRWLIRRKAHLRLVRQGTRVSGYRVLINMIRQPDWVYETPVHDMSVSDQDTNPHNSRMD
TCESMRAEAETMIQGLPIYVLRAVPAECSDCPICLEEFCVGQAVRGLPCAHNFHVACIDK
WLRLNMKCPRCRCMVFPICNQNETQVDPDRAAISTTHDLITQPSSSSYLVRMQSFLIPAN
GESTVPFNFSLSPSLNPTSMSTDGILPPVDYSSSPSPTATSNLSNKNAPVLESCPSPSYI
PTSAFTTSNKNARLSESCPIPSPIPTSTCKTSTPLYEPCPSLCPTPTSTSTPSKK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcttagttgggagcaatatcataaatgtagattaccattgcatttgtggata
gtggttgattatgccgttgtgttcgtttttcgactcttgatgcttgtggacaatgctatt
gctgcttcagttggattggatgatggtcggcagctaagaggttctcgttattatgggaga
ttattggttttgtgtattctttatgcagtactctatccgtttctttggatatggagtgtt
gttgggggtgtttggtttgctggcgctatgaaatgtttgcctgaacgacaccagaaatgg
ggttataccgtatggttactttttagcttttgtggactcatctgcctagctggtattttt
tggaaacggtggttaataagaaggaaggcgcatttaagacttgttcgacaagggactcga
gtttcaggatacagggtgttgattaacatgattcgtcaaccagattgggtatacgaaacc
cctgttcatgatatgagtgtttcggaccaagacaccaacccgcataattcacgaatggat
acgtgtgaatccatgagggcagaagccgagactatgattcaaggacttccaatttatgta
ttaagagctgtccctgctgaatgcagtgactgtccaatttgtttagaagagttctgtgtt
gggcaagcggttcgtggccttccttgtgctcataactttcatgtggcatgcatcgataaa
tggcttagactaaatatgaaatgccctcggtgccgttgtatggtctttcccatttgcaac
caaaatgaaactcaagtggatcctgaccgtgcagccatctcaacaactcacgacttgata
acgcaaccttctagctcaagttaccttgtgagaatgcaaagttttctcataccagctaat
ggagaaagtacagtgccgttcaacttcagcctgagtccgagcctgaaccccacctccatg
tccactgatggaattttgccgccagttgactatagctctagtccgagccccacagctacc
tctaacttgagcaacaaaaatgcaccggtattagaatcctgcccaagcccgagttacatc
cccacctctgccttcaccacaagcaacaaaaatgctcggctatctgaatcctgcccaatc
ccgagccccatccctacctctacctgcaagacaagtacaccactatatgaaccctgccca
agtctgtgccccacccccacctctacctccactcctagcaaaaaataa
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