Erigeron canadensis (horseweed): 122610688
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Entry
122610688 CDS
T07610
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
ecad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122610688
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122610688
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122610688
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122610688
03036 Chromosome and associated proteins [BR:
ecad03036
]
122610688
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122610688
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122610688
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122610688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
ZIP4_domain
Motif
Other DBs
NCBI-GeneID:
122610688
NCBI-ProteinID:
XP_043639591
LinkDB
All DBs
Position
8:34185230..34186972
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AA seq
463 aa
AA seq
DB search
MGAQRNSPKTIVASPVGKSTTLQFLFNLDSKVCSSQKDDNKTESLDSEGEELKLIITYCT
QLRSDDQESALKRLKLTQILSIIKTSITMISDEALDSLFKMVACNIFRPLPLPSITVCSI
VSPEDDDAIATPSAAWPYLQIVYDILLRLITKKDVKTLCREHIDGSKTSNQGTPIDEQLI
SRNFILNLLTLFNSDDPRERDAVKNIVHRIYSKFTFYRSFMRKAMTEFFLYFIYETDHRQ
NGIGELLEIWGSIINGFTVPLKDEHKVFLSRVLIPLHKPKNMAVYHRQLGYCVSQFVQKE
PELGPVVIRKILRYWPVTNCQKEVLLIGELEEIVEYLDRRQYLKIAFPLWTQITKCIKSN
NSQVAERALYVWNNEQFTRVVSQDIEMVFPILVEAIEKNIMLHWCKSVQQLTLNVKVLLE
ELEPVLYKTCLEGIRIHEFTAKLEENARRTTWEKIEMAAKANN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggggcacaaagaaacagccccaaaacgattgtagcatcgcctgttggaaaatccacg
actctgcagttcctcttcaatcttgattcaaaagtttgcagtagtcaaaaagacgataat
aagactgaatctttggactcagaaggcgaagaacttaaattgataatcacttattgcact
caactgcgttcagatgatcaagaatctgctttgaaacgactcaaacttacacagatttta
tctataatcaaaacatcaataactatgatttctgatgaagccttggatagtttgttcaaa
atggtggcttgtaatatcttccgccctcttcctcttccgtctattaccgtgtgctctatt
gtatcccctgaagatgatgatgccattgccacaccttctgccgcttggccatacctgcaa
atcgtttatgatattctcctccggttgataaccaagaaagacgtcaaaaccctttgcaga
gaacatatcgacggatccaagacttcaaaccagggtactcctattgatgaacaattaatc
agtcggaacttcattctgaacctccttactcttttcaactcggatgacccacgtgagcgt
gacgctgtgaaaaacattgtacaccgaatttactcaaagttcacattctacagatctttc
atgagaaaagcaatgacagaatttttcctatatttcatctatgaaactgatcacagacaa
aatgggataggagagcttcttgagatatggggaagtataatcaatggatttacggttcca
ttgaaagatgaacacaaagttttcttatcgcgggttttgatcccattgcataaaccaaag
aatatggcagtttatcatcgccagttgggttattgcgtgtcacagtttgtgcaaaaggag
cccgaacttggccctgttgtgatcagaaagattttgaggtattggcccgtgacgaattgt
caaaaggaggtgttgttaattggtgagctggaggaaatcgttgaatatcttgatcgcagg
cagtacttaaagatagcttttcctttgtggactcaaatcacaaaatgcatcaagagtaac
aattcacaggtagctgaacgggctctatacgtttggaacaacgaacagttcacgagggtg
gtgtctcaagatatcgagatggtgttccctattctagtcgaagccattgaaaagaacatc
atgttgcattggtgcaaaagtgtacaacaactgacgctaaatgtgaaggttttgcttgaa
gaactcgagcccgttctttacaagacgtgccttgagggtatcaggatacatgaattcact
gctaagttagaagaaaatgcgaggaggacgacatgggagaagattgaaatggcagcaaaa
gctaataactag
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