Erigeron canadensis (horseweed): 122610864
Help
Entry
122610864 CDS
T07610
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122610864
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
122610864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
DUF1441
Motif
Other DBs
NCBI-GeneID:
122610864
NCBI-ProteinID:
XP_043639755
LinkDB
All DBs
Position
8:complement(41383608..41384984)
Genome browser
AA seq
424 aa
AA seq
DB search
MDHVKKNFTLMGISAVLLAVTVTSAVVNAEVQSGSNQKAIEFLEKGPNDNAWWATDKKRS
NLNVDPKALKPNVVVAQDGSGTFSTIMDAVRSVPQNNKHRFIIFIKQGTYMEYVDIPDGV
DNVVFIGEGPTKTRISGSRSYDDVNDTYRTATVGVNGAGFMAKGIGFENTSGPLKHQAVA
LRVSGDRAIFNNCAIDGYQDALYAESQRQFYRHCTIRGTVDFIFGDAQAVFQDCKIIVRK
PLENQVCVVTAQGRSNPTSKGALIIQGCTITAEPAYMATNPMPKSYLGRPWGIYSTTIIM
QSFIDRNIDPEGWSPWDETRAGLDTCHYAEFDNRGPGANTAQRVNGKGIKKISPQEADSY
TPGKYINGGLWIKPARVPYDPGMMNVYKTGYQEPYGVQIGQAHNHLRAHNFLYILVFIGF
FKIQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaccatgtcaagaagaacttcaccttaatgggaatcagcgccgtcttattagcagtg
acagttaccagtgcagttgtaaatgctgaagtacaaagtggttctaaccaaaaggcgatt
gagttcctagaaaagggcccaaacgataatgcatggtgggctacagataagaagcggtca
aatcttaatgttgatccaaaagcattaaagcctaatgtagttgtggctcaagatggttca
ggaacgtttagtaccatcatggatgcggttagaagtgttccccaaaataacaagcatcgg
tttatcatcttcattaagcaagggacatacatggagtatgtagacataccagatggtgtt
gataatgtcgttttcattggcgaaggtccaaccaaaaccaggatctccggaagcagaagc
tacgatgatgtaaatgatacttacaggacagctactgttggggtcaatggagctggcttt
atggcgaaaggaatagggtttgagaacacgtcgggcccacttaagcatcaggcagtcgcc
ctacgtgtctctggtgacagggccattttcaacaactgtgcaattgatggataccaagac
gccctttacgccgagtcacaacgccagttttaccgccattgcaccatcaggggaacagtt
gattttatatttggtgacgcacaagccgtcttccaagactgcaagataattgtccgaaaa
ccccttgaaaaccaagtttgtgtggttacagcccagggacggagtaatcccacatcaaaa
ggggcactaatcattcagggttgcaccatcacagcggaaccagcctacatggccaccaac
ccaatgccaaaatcctacctcggccgcccatggggaatttactcgacaaccataatcatg
cagtcgtttattgacagaaacatagacccagaagggtggtcaccatgggacgaaacaaga
gccgggcttgacacatgtcactatgcagagtttgataacagaggaccaggggctaacaca
gcccaaagggtaaatgggaagggtatcaagaaaataagcccacaagaggctgatagttat
actcctgggaaatatataaatggaggtttatggattaagccagcccgtgtcccttatgat
cccggcatgatgaatgtctacaagaccggctatcaggagccttatggggtgcaaataggc
caggcccacaaccatttaagggcccataattttctttatatactcgtatttataggcttt
ttcaagatccagtaa
DBGET
integrated database retrieval system
