KEGG   Erigeron canadensis (horseweed): 122610869
Entry
122610869         CDS       T07610                                 
Name
(RefSeq) squalene synthase-like
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad00100  Steroid biosynthesis
ecad00909  Sesquiterpenoid and triterpenoid biosynthesis
ecad01100  Metabolic pathways
ecad01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    122610869
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    122610869
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ecad01006]
    122610869
Enzymes [BR:ecad01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     122610869
Prenyltransferases [BR:ecad01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   122610869
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 122610869
NCBI-ProteinID: XP_043639762
LinkDB
Position
8:complement(41595712..41616149)
AA seq 459 aa
MASLQAMLVNYRNNNIFYGPMLMKPKITKMARKEILMGAKKEISVKPAADRGSRYSKPHK
ESLKAVLIEHPNELYPLLKLFIAMKKAELPMFAEPHWEFCYFMLHRLSSMSVLMIQQLDN
IESRRATCLCYLILRALDTVEDDMSIPTDIKIPILKNFHRYIYDPNWHFSCGDHERKELM
DNFHHLSTAFLELEQRQQEAIENVTMRMGAGMAKFYSKEVKTLDDYEEYCSCVGGLATLG
WGKVIHASEPKFLFSDSVLILLGLLVQKSDVIKDFLEDINEIPKPSCHWPREIWRKYVNN
LEDLKYEENSTKAIQCLNEMVTDALVHINDCLYYLSQMRDPTIFRFFAILQIFAIGELAL
CYNNIQLFRGELTLRPGLVAQIFDRTRTMADVYGAFYDFSTILRSKVDMNDPNAITTISR
IEAVQKTCRDSGTLTKWKSYVVKKEPNYKRPLVTVSSFF
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcaagtttgcaagctatgctagttaactatcgaaataataatatcttctacggcccg
atgttgatgaagccgaagatcaccaagatggcacgaaaagagattttgatgggggcaaaa
aaggagatatcggtgaaaccagctgcagataggggatcccgttactccaagcctcataag
gagagtttgaaggcagtattgatagaacatccaaatgagttgtacccgttactgaagctg
ttcatagccatgaagaaggcggagcttccaatgtttgctgagccacactgggaattttgt
tacttcatgcttcataggctgtctagtatgagcgtgctcatgattcagcagctggacaac
atcgagtctcgtcgtgcgacatgcctatgttatttgattcttcgagcccttgacaccgtt
gaggatgatatgagtatacctactgatattaagataccgattctgaagaacttccatcgc
tatatatatgatccaaactggcacttttcatgcggggaccacgaaaggaaagaactcatg
gacaactttcatcatctttctacagcctttctcgaacttgaacaacgtcagcaagaagca
attgaaaatgttaccatgagaatgggggcggggatggcaaagttttatagcaaagaggtt
aagacacttgacgactatgaagagtattgcagctgcgttggtgggctagctactttgggg
tggggaaaagttatccatgcctcggagccaaaattcttgttttctgattcggttttgatt
ttgcttggcttattagtccagaaatctgatgtcattaaagattttcttgaggacataaat
gagatacccaagccatcttgtcattggcctcgcgaaatctggagaaaatatgttaataat
cttgaggacttgaaatacgaagagaactcaactaaggccattcaatgcctaaatgagatg
gtgacggatgccttggtacatattaatgattgtttgtactatctgtcccagatgcgtgat
ccaactatctttaggttctttgcgatactacagatttttgcaatcggagagctagcttta
tgctataataacatccaactttttagaggtgaactaacattgaggcctggtcttgtggct
caaatttttgatcgaaccagaacaatggcagatgtttatggggctttttatgatttttct
accatccttaggtccaaggttgacatgaatgatccgaatgccataacaacaattagcagg
atagaagcggttcaaaaaacttgcagggactcgggaacccttactaaatggaaatcctat
gtggttaagaaagagccaaactacaaacgacctttggtaacagtatcttcttttttttaa

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