Erigeron canadensis (horseweed): 122611064
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Entry
122611064 CDS
T07610
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04016
MAPK signaling pathway - plant
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122611064
04075 Plant hormone signal transduction
122611064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122611064
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122611064
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_INO4
RBR
Motif
Other DBs
NCBI-GeneID:
122611064
NCBI-ProteinID:
XP_043639955
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Position
8:47128289..47130559
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AA seq
637 aa
AA seq
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MTDYRLPTMNHWNPDDNNNSSMLDAFVSSDMTSIWSNTQTTTTTTTLPHTSSSASTSANV
AMFNHDTLQQRLQGLIDNARESWTYAIFWQSSVVDYSGPPVLGWGDGYYKGEVNKPPKST
LSQTSLAEQQYRKKVLRELNSMISGTQVPENDSVDEEVTDTEWFFLISMTQSFVNGNGLP
GQAAFGNQPVWVAGRDRLMTSHCERARQGYGFGLQTIVCIPSSDGVIELGSTDLILHSSD
VMRKVRVSFNFNDGVGRDNTMQIPVADNNNDDINEDDPSSIWLTDPVASSTVTASVDVMG
SQIIPSSKPLQNPNPNPNSHGLFGSRELNFSGGRNGNSTNTKPESGKILSFGEKMTAGGM
FSGQSHFGNEENNSNKKKKRSPTSCGSNEDGMLSFVSGVIPSSSTVKSGGGGGSDHSDLD
ASVIREVESSRMVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPN
VSKMDKASLLGDAILYINELKMKVETTHSDKEELRNQVDVLKKELLSKDSKQSSSSAISL
PEDMKMSTNRRIQVADLEVDVKVIGWDAMLRIQSNKKNHPAARLMVALKDLDLEVNHSSV
SVVNELMIQQATVKMGGRLYTQDQLRIALTNRFSDPL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgactgattaccgattaccgaccatgaatcactggaatcccgacgacaacaacaactcc
tcaatgttggacgccttcgtcagttccgacatgacatcaatctggtccaacacacaaaca
accaccacaacaactacactgcctcatacttcttcatccgcttctacatcagccaacgtc
gcgatgtttaatcacgacacgttgcaacaacgtctccaagggttgattgacaacgcgcgt
gagtcatggacttatgccatcttttggcaatcctctgttgtagattactccggcccccca
gttttaggttggggggacggatactacaaaggggaggttaataaaccccccaaatccact
ctttctcaaacttctttggctgaacaacagtatcgaaaaaaagttcttagggaacttaat
tccatgatttccgggacacaagtcccggaaaacgattcggttgacgaagaagtcactgat
accgagtggttctttttgatatccatgacccagtcgtttgtcaatggtaacggacttccg
ggtcaagcggcgtttggaaaccaaccggtctgggttgcgggtcgtgatcggctgatgacg
tcacactgtgagcgtgcgcgacaaggttatgggtttgggttacagactattgtttgtatt
cccagctcagatggtgtgattgagctgggttctactgatttgattcttcatagttccgat
gtgatgcgaaaagttagggtctcttttaattttaatgacggcgtgggacgtgataatacg
atgcagatccccgttgctgacaacaataatgatgatattaatgaagatgacccttcatct
atttggctgaccgatccagtagcttcgtctaccgtaacggcttcagttgatgtgatggga
tcccaaattatcccatcctcgaagcctcttcaaaacccgaacccgaaccctaattctcat
ggattattcgggtctagggagttgaatttttcgggtgggagaaatgggaattcgactaac
accaaacccgaatcgggtaaaatattgagttttggcgagaaaatgactgcaggcggtatg
ttttcgggccaatctcatttcggaaatgaagagaataacagcaacaagaagaaaaagaga
tctcctacttcgtgtgggagtaatgaagacgggatgctctcttttgtctctggcgtgatt
ccgtcttcgagtactgtgaaatcaggtggcggcggaggatcggatcactcggatcttgat
gcgtctgtgattcgagaagtggaaagttctagaatggtggaaccggagaaaaagcctaga
aagcgagggcgaaagcctgctaatggaagagaagaaccattgaatcatgtggaagcagag
agacaaaggagagaaaagttgaaccaacggttttatgctcttcgtgctgtcgtcccaaac
gtctcgaagatggacaaggcgtcgctccttggcgacgccatcttgtacatcaatgagctc
aagatgaaagttgagaccacacacagcgacaaagaagagctaagaaaccaagtcgatgtg
ttgaagaaagaattgttaagcaaggattcgaagcaatcgtcgtcctcagccatttcgcta
ccagaagatatgaaaatgtctaccaacagacgcatacaagtggcggatttggaagtcgat
gtgaaggtcattggttgggatgccatgcttaggatacaaagtaacaagaaaaaccacccc
gctgcaaggctaatggtggcattgaaagacctcgatttggaagttaaccactcgagtgtg
tcggttgtgaacgagttgatgatccaacaagccactgtgaaaatgggcggacgattgtac
actcaagatcagctccggatagccttaaccaacagattttcggatccgttatga
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