Erigeron canadensis (horseweed): 122611105
Help
Entry
122611105 CDS
T07610
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like isoform X1
KO
K25871
zinc finger protein IDD14/15/16
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122611105
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122611105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
C2CH-4th_BIRD-IDD
zf-met
zf-C2H2_6
zf-MYST
zf-C2H2_jaz
zf-H2C2_2
zf-C2H2_4
Actin_micro
OEP
DUF3391
Motif
Other DBs
NCBI-GeneID:
122611105
NCBI-ProteinID:
XP_043640010
LinkDB
All DBs
Position
1:complement(38142740..38145400)
Genome browser
AA seq
391 aa
AA seq
DB search
MLDNHHHHHHHFTSTPGPSSGLGGPSSSSDHFPSQDNINNGPPGKRKRRPAGTPDPDAEV
VSLSPKTLLESDQYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDSPEIKKRVFVCPEP
SCLHHDPCHALGDLVGIKKHFRRKHSNNKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSC
DCGRVFSRVESFIEHQDACTVRRVHADLPAFQPACSSRTASSTSPSSDKNNFSSIPTTMP
IRHIPHFQQQDIQRNLELQLLPSLSLYEHNNLNLSIGSGHSLQNKEEEMRIAMADKAFAE
DARQQAKRQIEMAEMEFENAKRIRQQAQVELERAKVLREQATKKISSTMLEITCYSCRQR
FEAASYIGAASTMDETSIAPSYMSSALTEGE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgttagacaatcaccaccatcaccaccaccacttcacttcaacacctggccctagttca
ggtttagggggtccttcttcttcttctgatcattttccttcccaagataatattaataat
ggtcctcctggcaaaagaaaaaggcgccctgcgggtactccagatccggatgctgaggta
gtgtctttgtcaccaaagacattactagagtcagaccaatacgtatgtgagatctgcaac
caagggtttcaacgggatcagaatctacaaatgcatagaaggcgtcacaaggtaccatgg
aaattactaaaaagggattcacccgagatcaagaagagggttttcgtgtgccccgaaccg
agctgtttgcaccatgatccatgtcatgctcttggagacttagtagggatcaaaaaacac
tttagaagaaaacacagtaataacaaacaatgggtttgtgataagtgctcaaagggatat
gctgttcaatctgattataaagctcatcttaaaacttgtggcactagaggtcattcttgt
gactgtggtagagttttttccagagttgagagtttcatcgagcaccaagacgcctgtacg
gtccgaagagtccatgcggacttgccagcattccagcccgcatgttcatctcggaccgca
tcaagtacaagtccatctagtgacaagaataatttcagttccattccaactactatgcca
ataagacatattccacatttccaacaacaagacattcaaaggaacttggaacttcaacta
ttaccatcattatccctctatgaacataacaatttgaatctctcgattggaagcggacat
agtttgcaaaacaaagaagaagaaatgaggattgctatggcagacaaggcatttgcagaa
gatgcaaggcaacaagccaagagacaaattgagatggccgagatggagttcgaaaatgca
aagaggattaggcaacaagcacaagtggagttagaaagggctaaagttctacgcgaacaa
gcgacaaaaaagatcagttccaccatgttggagatcacttgttattcttgtaggcaacgg
tttgaagccgctagttatattggcgctgcgagtacaatggatgagacctccatcgccccg
agttacatgtcttcggcattaactgaaggtgaataa
DBGET
integrated database retrieval system
