Erigeron canadensis (horseweed): 122611126
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Entry
122611126 CDS
T07610
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122611126
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122611126
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
122611126
NCBI-ProteinID:
XP_043640031
LinkDB
All DBs
Position
8:39578317..39586595
Genome browser
AA seq
1630 aa
AA seq
DB search
MFRAPTASVGGGGGGGVPLTSSITTQSPNTVDMGGGGGVDPTHHRTSARAFQFHPARPLI
IELFNLYLGRSGREKSDDLVREPPNKTQKRVTALNRDLPPPNEQFLVDFEQLQNQFPDRE
QLRMVSESVLISLVIQCSNHAPRAEFILFALRNLYNIGYINWDTFLPSLLSAVSSAEMSV
SGISSAASPQPTVSSASLSQTGMLPSSATIPSSSNFQTSSPASPLISVHGIGSPSQSANE
PSATPLSPVKSSDINNSGHNSRTNMLIRDNAISSLRQLCCKIIFSALEVNLKPSTHADIF
NHMMNWLVNWDQQQQGSDEVDGLKSWKRDKALFEWLHNCLDVIWILVDDSKCRVPFYELV
RSGLQFLQNISDDEALFTLILEIHRRRDMMAMHMQMLDQHIHCPTFGNQRLLTLATTNIS
AEAAINMRYSPITYPSVLGEPLNGEDIALCVQRGSLDWERALRCIRHALRSTPAPDWWRR
VLLVAPSNRTQSQALITPGAVFTADMICEANIDRIVELLRLTNSEINCWQEWLIYSDVFF
FLIKSGCIDFVDFVDKLVLRLAEDDHQILRTNHVTWLFAQVIRVELVMTALNQDSRKVET
TRKILSFHKEDRNSDPNNPQCILLDFISSCQNLRIWSINSATREYLNGEQLQKGKQIDEW
WRQVTKGDHMIDYMNLDDRSVGMFWVVSYTMAQPASDTVISWLTSAGHAELPGPNLQSND
RISMMREVPPVPISLMSGFSINLCLKLAFQMEEAMFSGEHVPNIAMVETYTRLLLIQPHS
LFRSHLSHLHQRNPSILNKPSATLLVLEILNYRLFSLYRYQGKSKTLMYDVTKILSTLKG
KRGDHRVFRLAENLCMNLILSLREFFFVRKEGKGPTEFTETLNRISVVNLAIIIKTRGIA
DAEHLLYLQTMLEQILATSQHTWSGKTLRYFPPVLCDALIGRIDKRGFAIQTWQQAEATV
INQCTQLLTPSANPTYVMTYLNTSFPQHRQYLCAGAWVLMHGHPENINSANLGRVLREFS
PEEVTANIYAMVDVLLHNMQLELQHGHLLQDLILKACANLAYFIWNHELLPLDILLLALI
DRDDDPHALRIVVNLLERQELQQRIKFYVANRGKPEHWLQTVAFKRIELQKALGNHLSWK
ERYPTFFDDIAARLLPVIPLIIYRLIENDAAEAADRVLQFYSTFLHYYPLNITFVRDILA
YFYGHLPGKLIFRILNVLDIKKMPFSESFPQHVNSPNATCPPLEYFASLLCNLVHNVIPQ
CNSKVDTSNNGARPITNRNPATNQPGSTNTLEGQKAFYQIQDPGTYTQLFLETAVIEVLS
LPVTAAQIVTALVQIIIHIQPTLTQSNHGFHGSSTSSGQGSALPTSPSGGSTDSLGRCRQ
NATGMGFVSRSGYASQQLSCLMIQACGLLLAQLPAEFHIQLYAEASRVIKESWWVMDGKR
STSELDSAVGYALLDPTWAAQDNTSTVIGNVVALLHSFFSNLPQEWLDKTHLLVNHLRPI
KSVAVLRIAFRIVGPLLPRLANAHSLFSKTLELLLNMMVDVFGRNSQPSTPVEASEITDL
IDFLHHIVHYEGQGGPVQPNSKARPDVLALCGRAIENLRSDVQHLLSHLKTDANGSIYAA
THPKLFQSPS
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagcacccacagccagcgttggcggtggcggaggcggtggtgttcccttaaca
tcatccatcaccacccaatcaccaaatacggttgacatgggtggtggtggtggtgtcgat
ccgacccatcaccgaacttctgcccgggccttccaattccacccggcccgaccccttatc
attgaactctttaatctttaccttggtagaagtggtcgtgaaaagtcggatgatttggtc
agagaacctccgaataagacacagaagcgagttactgctcttaacagagaccttcctccg
ccaaatgaacagtttcttgttgattttgagcagcttcagaatcaatttcctgacagagaa
cagttaagaatggtatccgaatctgtgcttatatctctggttatccagtgtagtaatcat
gcaccacgggcagaatttattcttttcgctttacgtaatttgtataacattgggtatata
aattgggatacgtttctaccatctcttctttctgcagtttcatctgcagaaatgtccgtt
agtggtatctcttctgcagcttcgccacaacctactgtttcgtctgcatctttatcacaa
actggaatgttaccgtcatcagccacgattcccagttcttcaaattttcagacttcaagt
cctgcatctcctttgatttctgttcatggtattggctcgccgtcccaatcagcaaacgaa
ccatcggctacacctttatcacctgtaaagtcgtcggatattaacaatagcggccataat
tcgagaactaacatgttaataagagataatgctataagcagtttacgccagttatgttgt
aagataatcttttccgcattagaagttaacttaaaaccatcaactcatgctgatattttc
aatcacatgatgaattggctggttaactgggaccaacagcaacagggaagtgacgaggtt
gatggcctaaaatcatggaaaagggataaagccttatttgaatggctacataattgttta
gatgtgatttggatattggttgatgatagtaaatgccgcgtgcctttctatgagttagtt
cgaagcggactacaatttttacagaatatatctgatgacgaggcattatttactcttatc
ttggagattcataggagaagagatatgatggctatgcacatgcaaatgttggatcaacat
attcactgcccgacatttggtaatcaacgccttctgactctggctacaactaatatatca
gcggaagcagccataaatatgagatattcgcctattacatatccaagtgtgcttggcgaa
cccctgaatggggaggatatcgctctctgtgttcagagaggtagtcttgattgggagcgg
gccttgcgttgtatcaggcatgctcttcgtagtacgccagctcctgattggtggagacgt
gtgcttctagtggcaccaagtaaccgcacacaatcacaggcactcatcactcctggtgct
gtttttactgcagacatgatctgtgaggcaaatattgatagaattgttgaactattgagg
ctgacaaattcagaaataaattgctggcaggagtggcttatctattcagatgtgtttttt
ttcttaatcaaaagtggctgtatagattttgtcgattttgtggacaagttagttttacgc
ctagctgaggatgatcaccagattcttaggacgaatcatgtgacatggttgtttgcacaa
gttatccgggttgagcttgtaatgactgctttaaatcaagactctagaaaggtggaaaca
accagaaagattttgtcatttcataaagaagatcgtaactctgatcctaataatcctcaa
tgtatcctgctcgatttcataagcagttgtcagaaccttcgtatatggtcaatcaactct
gcgactcgagaatatttgaatggtgagcagcttcagaaaggaaagcaaatagatgaatgg
tggaggcaagttactaaaggggatcatatgatcgactatatgaatctggatgatagatca
gttgggatgttttgggttgtgtcttacacaatggcacaacctgcttctgacacagtgata
agctggttaacatctgctggacatgcagaattaccaggaccaaatctacaatctaatgat
agaatatcgatgatgcgtgaagttcctcctgttccgatatcattgatgtctggtttttca
attaatttgtgcctcaagctcgcttttcagatggaagaggctatgttctctggagagcat
gtccctaacattgcgatggttgaaacatataccagattgctgctcatccaacctcattca
ttatttcgttcacatttaagtcatctgcatcagaggaacccttctattttaaataagcca
tcagctactcttttggttctggaaattcttaactaccgtttattttccctatacaggtac
caagggaagagcaagacattaatgtatgatgtcaccaaaattctctctactctaaaaggc
aagcgtggagatcatcgtgtgtttagattggcggaaaacctgtgcatgaatctcatttta
tcattgagagagttcttttttgtgaggaaggaaggaaagggtcccactgaattcactgaa
acgttaaatcgtataagcgtagtgaatcttgccattattatcaagactcgtggaattgct
gatgctgaacaccttctctatcttcaaacaatgttggaacaaatcttagcaactagtcaa
catacttggtctggaaagacccttcgttactttccacctgttttatgtgatgccttgatt
ggcaggatagacaaaagaggctttgcaattcaaacctggcagcaggctgaagccactgta
attaatcagtgtacccagcttctcacaccatcagctaatcctacttatgtcatgacttat
cttaatacgagttttcctcaacatcgacaatatttatgtgctggagcatgggtgctcatg
catggccaccctgagaacattaatagtgcaaacctggggcgtgttctaagagagttttct
cctgaggaggtgactgcaaatatatatgctatggtggatgttcttttgcataacatgcaa
ttggagctacagcatggacatctcttgcaggatcttatcttgaaggcctgtgcaaatctt
gcttactttatttggaaccatgagctgcttcctttagacattttgcttctggcattaatt
gaccgtgacgatgatccacatgctttgcgtatcgtggttaatttgcttgagcgacaagag
cttcagcagaggatcaaattttatgttgctaaccgtggcaagcccgagcattggcttcaa
actgtagcattcaagcgtattgaattacaaaaggctcttggcaatcatttgtcatggaag
gaaaggtatccgacattttttgatgatattgccgcacggttactccccgttatccccttg
atcatctatagacttattgaaaatgatgctgcagaagcagcagatagagttctccaattc
tattcaaccttccttcattactatcccttaaatataacatttgttcgtgatatactggca
tatttctacggacatcttccaggaaaactcatttttcgaatactgaatgtgctcgatata
aaaaagatgccattttctgagtcatttccacaacatgttaattcaccaaatgccacgtgt
ccaccattggagtactttgcatctcttttatgtaatcttgtgcataatgtcatccctcaa
tgcaattcaaaagtggatacttcaaacaatggtgcacgtcctatcacaaataggaatcct
gcaaccaatcaacccgggtcaactaacaccctcgaaggtcaaaaagcattctatcaaata
caagatcctggcacatacacacaactttttctcgaaactgcagtgatagaagtcctatca
ctgcctgtaaccgcagcacagattgtaacagcgcttgtgcaaataattatccacatacag
ccaactcttactcaatccaaccatggtttccatggatcttcaactagttcaggtcaagga
tctgctttgccaacttccccatcagggggaagtacggattctttaggcagatgcagacaa
aatgctactggcatgggatttgtttcaagaagtggttatgcgagccaacaactttcttgt
ttgatgattcaagcttgtgggctcctgttggctcagcttcctgctgagtttcacatacag
ctttacgcagaggcgtcacgtgtgatcaaggagagttggtgggttatggatggaaagcga
tcgaccagtgagctagattctgctgttggctatgctttgttggatccaacatgggctgct
caagacaatacttccaccgtcattggaaatgtggttgctctgcttcattcgttcttcagt
aatcttccacaggaatggttagataaaacacatctacttgtaaaccatctacggcccata
aaatcagttgcggtgttgagaatcgccttccgtattgtgggtccattgctgccaagatta
gcaaatgctcacagtttgttcagcaagacccttgaactactgctaaatatgatggtggat
gtctttgggaggaactctcagccatcaactcctgttgaagcatcagaaataactgaccta
attgatttccttcatcatattgtgcattatgaaggtcagggaggacctgtacagccaaat
tcaaaagcaagaccagatgtattggctttatgtggaagagccattgagaatttacgcagt
gatgtgcagcatctactttctcacttaaaaaccgatgcaaatggttctatatatgcagct
acccatccgaagctctttcaaagtccatcttga
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