Erigeron canadensis (horseweed): 122611191
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Entry
122611191 CDS
T07610
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122611191
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122611191
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122611191
NCBI-ProteinID:
XP_043640108
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Position
8:complement(33871435..33873732)
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AA seq
402 aa
AA seq
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MAPPFLTFIILSLFSLTLTFASKVQPPEHTVQQVQRSLNDSRRNLGFLSCGTGNPIDDCW
RCDPHWEKNRQRLADCAIGFGKGAVGGRDGKIYVVTDSGDDDAVNPKPGTLRYGVIQDEP
LWIIFQRDMVIKLKQELIMNSFKTIDGRGASVHIAGGSCITIQYVTNIIIHGINIHDCKQ
SGNAMVRSSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCADGLIDAIMGSTAITISN
NYMTHHDKVMLLGHSDSYENDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSANPTINSQGNRFLAPDRRFSKEVTKHEDAPESSWKNWNWRTEGDLMLNGAFFT
PSGAGASSSYARASSLGARPSSVVATLTTNAGALVCRKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaccatttctcacttttatcatcctatctctcttctctctcaccctcactttt
gcctccaaagtacaacctccagagcacaccgtacaacaagtacaaaggagtttgaatgat
tccagaaggaatctgggtttcttgtcatgtgggacaggaaacccaattgacgactgctgg
cggtgtgacccacactgggagaaaaaccgccagcgtctggcagactgtgccattgggttt
ggaaaaggagctgttggtggtcgggatgggaaaatatatgtggtgactgactctggtgat
gacgatgccgtaaacccgaaacctgggaccttacggtatggcgtcatccaagacgagccg
ctctggattatattccagcgcgacatggtgattaaacttaaacaagaattaatcatgaat
agttttaaaacaatagatggacgtggggctagtgtacatatagctggtgggtcctgcatt
accattcaatatgttacaaatattataattcacggaattaatattcatgattgtaagcaa
agtggtaatgcaatggtgagaagctctccaagacattttggatttaggactatatcggat
ggtgatggtgtgtcgattttcggaggaagtcatgtgtgggtcgatcattgttcgctatca
aattgcgctgacggcctgatcgatgcgatcatgggctcgaccgcaattacgatatctaac
aattacatgactcaccatgataaagttatgcttttgggccatagtgattcttatgagaat
gacaaaaacatgcaagttacaattgcctttaaccactttggtgaagggttggtccaaaga
atgcccagatgtagacatgggtattttcatgtggtgaacaacgactacactcattgggag
atgtatgcaattggtgggagcgcaaacccgactataaatagtcaagggaatagattcctc
gcacccgatagaagatttagcaaagaggtgacaaaacacgaggatgcacccgagagcagc
tggaaaaactggaattggagaacggaaggtgacttgatgttgaatggtgcatttttcaca
ccgtcaggcgctggggcttcgtctagttatgcaagagcttctagccttggggctaggccc
tcgtcggttgtagccaccctcacaaccaacgccggagcccttgtttgcagaaaaggctcg
cgttgttga
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